Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi181g00007 ATGCTTTGTTTTGACCACCATTCCAAGCTTGTTTCACAAATTCATGATGCCAATGAAGAAACAATCGATTCGGGTGACTATGATATTGATGATGATCACCATGTAATCAACTCTCTCCATGAATGTCGCACTTCAGAAGGGTACAAGAAGTTAGATGTTGATGCTGACCACATGAGGAGGAACATCATAGATTGGTTGATAGGCACACACTATGGATTAAAGCTTAGGCCAGAAACCCTTTATCTTTGTGTCAACATTCTTGATCGTTTTCTTTGCAAAACCAAGTTTGATAAATCAACTACAAAGAAGGAATTGGAGCTTGTGGCTGTTACCTCATTATTGTTGGCTTCAAAATATGAACAACAAAGGTCACTCTCTGTTTCTGCTTTGGAGTACATTACACAAAATTCTTGCTCACAAGATGACATACGTGGCATGGAAATTGTTATACTTTCAAAGCTTAATTGGGTTTTGACAGTTCCAACTCCTTATGTCTTTCTTCCTAGGTACATGAGGGCATGTCTTTTATATGATGATGACAAGATCATGGGGAACATGGTGTTTTTCTTATCTGAACTCAGCTTGACACACTATCCCATTATGAGTCACTACATGCCTTCTTTAATTGCAGCTTCTGCTGTGTATTGTGCCAGAATTATTGTTGGAAGGTTCCCTTTTTGGAACAAGAATCTGAAGAACTGTTCTGGGTATTCTAAGAAGAAGTTGAGTTCTTGTGCCAAGCTTATGCTGGAATTATGCAGGGAAACTTGTAGAGATGGGAACATGGAAGTTTTTAAGAAATTCTCTAGTCCAAATCATTTTAAGTTATGTGGTTGTTGA 840 0.3798 MLCFDHHSKLVSQIHDANEETIDSGDYDIDDDHHVINSLHECRTSEGYKKLDVDADHMRRNIIDWLIGTHYGLKLRPETLYLCVNILDRFLCKTKFDKSTTKKELELVAVTSLLLASKYEQQRSLSVSALEYITQNSCSQDDIRGMEIVILSKLNWVLTVPTPYVFLPRYMRACLLYDDDKIMGNMVFFLSELSLTHYPIMSHYMPSLIAASAVYCARIIVGRFPFWNKNLKNCSGYSKKKLSSCAKLMLELCRETCRDGNMEVFKKFSSPNHFKLCGC 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi181g00007 279 ProSitePatterns Cyclins signature. 59 90 IPR006671 -
Sebi181g00007 279 PANTHER CYCLINS 39 253 IPR039361 -
Sebi181g00007 279 PIRSF Cyclin_A_B_D_E 9 277 IPR046965 GO:0016538|GO:0044772
Sebi181g00007 279 SMART cyclin_7 165 251 IPR013763 -
Sebi181g00007 279 SMART cyclin_7 64 152 IPR013763 -
Sebi181g00007 279 SUPERFAMILY Cyclin-like 160 275 IPR036915 -
Sebi181g00007 279 Gene3D - 153 279 - -
Sebi181g00007 279 Pfam Cyclin, C-terminal domain 161 274 IPR004367 -
Sebi181g00007 279 SMART Cyclin_C_2 161 279 IPR004367 -
Sebi181g00007 279 FunFam G2/mitotic-specific cyclin 46 159 - -
Sebi181g00007 279 SUPERFAMILY Cyclin-like 56 156 IPR036915 -
Sebi181g00007 279 Pfam Cyclin, N-terminal domain 52 158 IPR006671 -
Sebi181g00007 279 Gene3D - 52 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi181g00007 Sebi-Chr181 71661 72850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi181g00007 56 269 Core Cell Cycle Gene Families AT2G26760 40.187 2.25e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi181g00007 K21777 - cave:132164002 192.971