Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi181g00001 ATGAATGAAAGATTTGGACGAGAGATTCGTGTTTTTGAAACATCTTCACTTTCTCCGTCACCAAATGCTGCAGCAAACAATGAAGAGGAGACTGATGACTTCTATGAGTTTACTGCTGAAGACTATCACAGACTTTTGGCTACTAAAAAAGAAGATAAATTCTTGAAGACTAGAAAAATCCGAGAAGCAGAAGAAGCAGCTCGTAGGTCAAGAATAACCAAAGCTGTAATTAGAGTTCGCTTCCCTGATAATCACACATTGGAGGCTACCTTTCACCCATCAGAAACAATCGCGAGTTTAATTTATCTCCTCACTAAAGTGATTGCACAACCAGATCAGCCATTTTATATATATACTACTCCACCTAAGAAGCTGATCAAAGACATGTCTCAAGATTTCTATACTGCTGGATTTTGTCCTGGTGCCATTGTGTACTTCTCATACAATGTTCCAAAAGGTGATAGTACTTCGGATGGTCCTGTTGGCCCTTACCTACTCGAAGAGGTAATGTCCTTGAAGGGTTTGGATGTTGCTAAAGATCAAGGTCAACCCTCAGATCCTGTACCGGCTGCACCAGTGCCTGCTGAGGCAACACAACCTCCTGCTGTTGAAGAACGTAAACCTGCTGAGAAAAAGCTTGTTAAACCAAAGTGGCTGAAAATGTGA 666 0.4144 MNERFGREIRVFETSSLSPSPNAAANNEEETDDFYEFTAEDYHRLLATKKEDKFLKTRKIREAEEAARRSRITKAVIRVRFPDNHTLEATFHPSETIASLIYLLTKVIAQPDQPFYIYTTPPKKLIKDMSQDFYTAGFCPGAIVYFSYNVPKGDSTSDGPVGPYLLEEVMSLKGLDVAKDQGQPSDPVPAAPVPAEATQPPAVEERKPAEKKLVKPKWLKM 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi181g00001 221 Pfam UBX domain 73 140 IPR001012 GO:0005515
Sebi181g00001 221 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 2 221 IPR044232 GO:0032984|GO:0051117
Sebi181g00001 221 CDD UBX2_UBXN9 75 148 - -
Sebi181g00001 221 MobiDBLite consensus disorder prediction 203 221 - -
Sebi181g00001 221 Gene3D - 8 145 - -
Sebi181g00001 221 ProSiteProfiles UBX domain profile. 70 146 IPR001012 GO:0005515
Sebi181g00001 221 SUPERFAMILY Ubiquitin-like 48 146 IPR029071 -
Sebi181g00001 221 MobiDBLite consensus disorder prediction 176 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi181g00001 Sebi-Chr181 6638 9474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi181g00001 3 95 C2H2 Transcription Factor Family AT2G01650 37.113 3.31e-07 48.1