Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi180g00128 ATGATGGGGAGTGGAAACATGAACCTTCCTCCTGGGTTTTACTTCTCTCCTACAGATGAAGAACTTGTCCTTCATTTTCTCTATTCCAAGGCTTCTTTACCATGCCATCCCAACATTATACCTGATCTTGACTTGTCTCTGCTTGACCCTTGGGAATTCAATGGTAAAGCTTTGTCAAGTGGAAATCAACACTATTTCTTCACTGAGAAGAAGGGAAACAGATCCACAGAAAATGGATATTGGAAGGAAATAGGAGTCACCAAATCAATAGTCTCATCAGATGCTGACAATAAAGTGGGAATCAAGAAGTACCTAGTGTTCAACCTTGGGAAAGCTCCACAAGGGACTGAAACCAATTGGGTAATGGAAGAATATCATATTTGCTCATCTGGGTTTAACACTGCTTCTTGTGGGAGAAGAAGAAATTCTGATCAAAGTTGGAGCAAATGGGTTTTATGCAGAGTATATGAAAAGAGGTCACAATCCCAACAAGGTGCAAAATGTTATAGCGATGAGGATGACAGTGGAACAGAGGTTTCATGGCTAGATGAAGTTTTTATGTCATTAGATGATGATCTTGAAGAAATAAGCCTCCCTAATTAG 603 0.398 MMGSGNMNLPPGFYFSPTDEELVLHFLYSKASLPCHPNIIPDLDLSLLDPWEFNGKALSSGNQHYFFTEKKGNRSTENGYWKEIGVTKSIVSSDADNKVGIKKYLVFNLGKAPQGTETNWVMEEYHICSSGFNTASCGRRRNSDQSWSKWVLCRVYEKRSQSQQGAKCYSDEDDSGTEVSWLDEVFMSLDDDLEEISLPN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi180g00128 200 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Sebi180g00128 200 Pfam No apical meristem (NAM) protein 10 127 IPR003441 GO:0003677|GO:0006355
Sebi180g00128 200 PANTHER NAC TRANSCRIPTION FACTOR 56 7 170 - -
Sebi180g00128 200 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Sebi180g00128 200 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi180g00128 Sebi-Chr180 1457115 1457951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi180g00128 2 163 NAC Transcription Factor Family AT1G61110 41.477 1.54e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi180g00128 NAM 3.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi180g00128 - - gmx:100779578 309.301