Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi180g00103 ATGGCGAAGCATCCAGTGGGGAAACCCGGACGGTGGGAGGCGATCGCGGCGGCGTTCGGAGGGCGGCACAAGGCGGAGAGCGTGATCAAGAAGGTGAAGGAATTGGGGGAAAAGAGAGTAGATGATTCGGACTCGTATGCGCAGTTTCTGAAGAAGAGGAAAGCATTGGATAAGAGAGTTGTTGAGGATGCAGGTGAAGAAGAAAGCGAATCGGTGACGGTGGAGAAGGTTGAAGGTGGTTGGAGTAAAACGGAGGATATTGCGTTGCTGAATGCTTTGAAAGCGTTTCCGAAGGATGTTCCCATGAGATGGGAGAAAGTTGCTGCTGCGGTTCCAGGGAAATCCAAGGCTGCATGCATGAAGAGAGTTACTGAATTGAAAAAAGGGTTTCGGAGTGCAAAAGCTGCATCTGAAGTGTAG 420 0.5095 MAKHPVGKPGRWEAIAAAFGGRHKAESVIKKVKELGEKRVDDSDSYAQFLKKRKALDKRVVEDAGEEESESVTVEKVEGGWSKTEDIALLNALKAFPKDVPMRWEKVAAAVPGKSKAACMKRVTELKKGFRSAKAASEV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi180g00103 139 SUPERFAMILY Homeodomain-like 77 126 IPR009057 -
Sebi180g00103 139 SMART sant 77 129 IPR001005 -
Sebi180g00103 139 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
Sebi180g00103 139 CDD SANT 81 127 IPR001005 -
Sebi180g00103 139 FunFam Myb family transcription factor 75 135 - -
Sebi180g00103 139 Gene3D - 1 41 - -
Sebi180g00103 139 Gene3D - 73 138 - -
Sebi180g00103 139 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 136 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Sebi180g00103 139 ProSiteProfiles Myb-like domain profile. 73 127 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi180g00103 Myb_DNA-binding 5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi180g00103 - - ahf:112791142 209.534