Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi180g00101 ATGGCTGCCATGAACTCTAGTGTATTGGCTTGTAGCTATGCTAGATCTGTTGCAGGATGCTCTGATCTCAATGCCAAGCTCACTTCCATGCCTTCAGTTGCATCCTCTGGTCACAAGTTACCTATGATCAAGGCACAACAGGCCATAGTTCCTAAAACCAAAGAATCACAAGGAAATGAAGGAAGGAGAGGTGCCCTTGTTCTATTGGCAGCCACCCTTTTCACTGCTGCTTCCAATTCTTCTGCCAATGCTGGAGTCATTGAAGAATACCTTGAAAGAAGCAAGGCCAACAAGGAACTGAATGACAAGAAGAGGTTAGCTACAAGTGGGGCAAATTTTGCAAGAGCATACACTGTTCAATTTGGAACTTGCAAGTTCCCTGAGAACTTTACTGGCTGCCAAGATCTTGCTAAGCAAAAGAAAGTGCCTTTTATTTCTGATGATTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 510 0.4314 MAAMNSSVLACSYARSVAGCSDLNAKLTSMPSVASSGHKLPMIKAQQAIVPKTKESQGNEGRRGALVLLAATLFTAASNSSANAGVIEEYLERSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi180g00101 169 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 169 IPR008796 GO:0009522|GO:0015979
Sebi180g00101 169 Gene3D - 85 169 IPR044907 -
Sebi180g00101 169 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 41 169 IPR008796 GO:0009522|GO:0015979
Sebi180g00101 169 FunFam Photosystem I reaction center subunit N 85 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi180g00101 Sebi-Chr180 1057444 1058164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi180g00101 1 140 Calmodulin-binding Proteins AT5G64040 66.207 3.21e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi180g00101 K02701 - cave:132166062 261.536