Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi180g00090 ATGGCAAAATCCCCTGCAACTGAACTCCCACTCAAAGCTTTTGGCTGGGCTGCAAGAGACACTTCTGGAATCCTCTCACCCTTTCATTTCTCCAGAAGGGAAAATGGCGATGATGATGTCACTCTCAAAATTCTATTTTGTGGGGTTTGCCATTCTGATCTGCACACTGTCAAAAACGATTGGGGTTTCACAACTTACCCTGTTGTTCCTGGGCATGAAATTGTTGGTGTTGTGACAAAAACTGGAAATAATGTGAAAAAATTCAGAGTGGGTGATAAAGTTGGAGTTGGTGTACTGGTGGAATCCTGTATGGCATGTGAGAATTGCCAGCAGGATCTGGAGAATTATTGTCCTAAACCTGTGTTTACTTATAATTCTCCTTACAAGGGGACACGAACCAATGGTGGCTATTCTGATTTTGTGGTTGTTCACCAGCGGTATGTGCTCCTATTTCCTGACAACTTACCCCTTGATGCTGGTGCTCCACTACTGTGTGCTGGGATTACTGTGTATAGCCCAATGATGTATTATGGGATGACCGAGCCTGGTAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATATTGCAATCAAATTGGGTAAAGCATTTGGGCTGAAAGTTACTGTCATTAGTACCTCTCCCAACAAGGAAGCTGAGGCCATTGAAAGACTTGGTGCTGATTCTTTTGTTGTTTCCACAGATCCTGAAAAAATGAAGGCAGCTATGGGAACACTGGACTATATCATAGACACAATTTCTGCTGTTCATTCCCTGATTCCACTGCTTGGCCTACTGAAGCTGAACGGAAAGCTGGTCATGGTGGGGTTACCTGGCAAGCCCCTTGAGCTGCCTGTCTTTCCTATAGTTGGTGGACGGAAGCTTATAGGGGGAAGCAACTTTGGAGGGTTAAAGGAGACTCAGGAGATGCTTGATTTCTGTGGAAAGCACAACATAACTGCAGATATTGAACTGATAAAGATGGACCAAATCAACACAGCCATGGAAAGGCTTAGCAAAGCTGATGTGAAATATCGCTTTGTGATTGATGTGGCTAATTCCTTTTCAAGCCTGTAG 1080 0.4454 MAKSPATELPLKAFGWAARDTSGILSPFHFSRRENGDDDVTLKILFCGVCHSDLHTVKNDWGFTTYPVVPGHEIVGVVTKTGNNVKKFRVGDKVGVGVLVESCMACENCQQDLENYCPKPVFTYNSPYKGTRTNGGYSDFVVVHQRYVLLFPDNLPLDAGAPLLCAGITVYSPMMYYGMTEPGKHLGVAGLGGLGHIAIKLGKAFGLKVTVISTSPNKEAEAIERLGADSFVVSTDPEKMKAAMGTLDYIIDTISAVHSLIPLLGLLKLNGKLVMVGLPGKPLELPVFPIVGGRKLIGGSNFGGLKETQEMLDFCGKHNITADIELIKMDQINTAMERLSKADVKYRFVIDVANSFSSL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi180g00090 359 SUPERFAMILY GroES-like 22 184 IPR011032 -
Sebi180g00090 359 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0016616
Sebi180g00090 359 Gene3D - 166 322 - -
Sebi180g00090 359 FunFam Cinnamyl alcohol dehydrogenase 166 322 - -
Sebi180g00090 359 Gene3D - 16 352 - -
Sebi180g00090 359 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
Sebi180g00090 359 Pfam Alcohol dehydrogenase GroES-like domain 38 149 IPR013154 -
Sebi180g00090 359 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
Sebi180g00090 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 320 IPR036291 -
Sebi180g00090 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Sebi180g00090 359 Pfam Zinc-binding dehydrogenase 193 314 IPR013149 -
Sebi180g00090 359 CDD CAD1 14 351 IPR047109 GO:0016616
Sebi180g00090 359 FunFam Putative cinnamyl alcohol dehydrogenase 6 323 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi180g00090 Sebi-Chr180 968010 970783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi180g00090 12 356 Monolignol Biosynthesis Gene Families AT2G21730 70.977 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi180g00090 K00083 - gmx:100819684 611.683