Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi180g00067 ATGTCAACAACTACTACTTCTCAAGCTATTGTTAACCATAGCTTATTTGAGGAGCAAAATCAGATGATGCCTATGCAAATGGGTTTCAATATTCCTTTCCCAACAAACCTAACCTTTCAAGCTCCTTTGGGTTGCAATAATATTCATCAATCTTTGAAAGCTTTCAGTTCCATAGCCTCTTCACTTGCATCTGAAGATTCAACATCAAATCTAACAGAAACCCTATTCTCAAACACTGATCATCATCATCATCAAAAATCAAGAGAATACCTAACTTCTAGCTTTTGTGGAGCTCAATTCCTTTCCTTGCATAGATCAAGTGTAAATCCATGGGCATTGGGAGAAGTAACTGATTGTTTCAGTAGTAAAAAAAGTGGTGATGATCATCATCTTGGAATCTCTGCCATGAAGATGAAAAAAATGAAGGCAAGAAGGAAGGTGAGAGAGCCAAGGTTTTGCTTCAAGACCATGAGTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGAAAGTATGGTCAGAAAGTAGTGAAGAACACACAGCACCCCAGAAGCTACTACCGTTGCACACAAGATAATTGTCGAGTTAAGAAACGTGTGGAGCGGTTAGCGGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGCACACTCTCCATCTAATGATCTTGAAGACTCTCAAACTCCATCTCAATTTACCAATTTCTTATGGTAG 723 0.3942 MSTTTTSQAIVNHSLFEEQNQMMPMQMGFNIPFPTNLTFQAPLGCNNIHQSLKAFSSIASSLASEDSTSNLTETLFSNTDHHHHQKSREYLTSSFCGAQFLSLHRSSVNPWALGEVTDCFSSKKSGDDHHLGISAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEDSQTPSQFTNFLW 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi180g00067 240 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 224 IPR044810 GO:0003700
Sebi180g00067 240 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi180g00067 240 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi180g00067 240 SUPERFAMILY WRKY DNA-binding domain 155 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi180g00067 240 Gene3D WRKY domain 150 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi180g00067 240 FunFam WRKY transcription factor 57 149 223 - -
Sebi180g00067 240 Pfam WRKY DNA -binding domain 164 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi180g00067 Sebi-Chr180 714205 715791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi180g00067 133 240 WRKY Transcription Factor Family AT4G39410 76.991 4.27e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi180g00067 WRKY 6.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi180g00067 - - pvu:PHAVU_002G266400g 350.517