Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi180g00042 ATGATTTTGATAGCATTTTGTTTTGTATGTCTTACTTCTCTGTGGCTATGGAGAACCAGCAACAATGCAAAGAAATTACCTCCAGGTCCAAGAGGATTGCCAATTTTGGGGAGCCTTCATAAGTTGGGTGCAAATCCTCATCGTGATCTGCACCAATTATCTCAAAAACATGGACCTATCATGTTCTTGCGCTTAGGTTTTGTGCCAACCATAGTTGTTTCTTCACCACAAGCTGCTCAACTGTTCTTAAAGACCCATGACCTTGTGTTTGCTAGTAGACCACTTCATGAGGCTGCAAAGTACATATCTTGGGAGCAGAGGAACTTGAGCTTTGGTAAATATGGTTCTTATTGGCGCAACATGCGTAAGATGTGCACTTTGGAATTGCTAAGCCAAACCAAAATTAACTCCTTCAAACCCATCAGGGAAGAGGAGCTTGACCTTTTGATCAAGCTTCTAAGAAAGGCAGCCAATGATGGAGCTGATGTTGATGTTAGTGCCAAAATTTCAACACTGACTGCAGACATGAGTTGTAGAATGGTTTTGGGGAAGAAGTACATGGACCATGACTTGGATGAGAAAGGTTTCAAGGCTGTTATGCAAGAGGCAATGAATTTAGGAGCAACACCTAACATTGGTGATTACATTCCTTATATTGCTGCACTTGACCTTCAAGGACTAACTAAGCGCATGAAGGCAGTGCACAAAATCTTCGATGATTTCTTTGAGAAAATTATTGATGAACATATACATATGCAATCAGACAATGAAGAAGATAAGATCAAGGATTTTGTGGATATCATGTTAGGCTTTGTTGGTACTGAAGAATCTGAGTACAGGATTGAAAGGCCCAATATCAAAGCCATATTGCTGTGGCGGACACCGCGATCTGGTGAGGTAGAGGCTCTATGTCTCACGATTAAGAAGGTTGCGCTGCCACCAGCCACCATAGAACCACTGCAGTCGCGTGCGATGCCTCACTGGTTCGGTCTACCACCGCCGCGTGTCTTTTGCGCCTTCACTGTCGCTGCCATCGCGTTTCCCCTCCGCGCGTCGTCCACAACCGCGTTCATGGCCACTATGAACGGATGGAAAGAGGAAGGTCGTGCGCAGTGGTCCTGGTGGTGCACCGTGCTGAAAAAGCATTAA 1149 0.4482 MILIAFCFVCLTSLWLWRTSNNAKKLPPGPRGLPILGSLHKLGANPHRDLHQLSQKHGPIMFLRLGFVPTIVVSSPQAAQLFLKTHDLVFASRPLHEAAKYISWEQRNLSFGKYGSYWRNMRKMCTLELLSQTKINSFKPIREEELDLLIKLLRKAANDGADVDVSAKISTLTADMSCRMVLGKKYMDHDLDEKGFKAVMQEAMNLGATPNIGDYIPYIAALDLQGLTKRMKAVHKIFDDFFEKIIDEHIHMQSDNEEDKIKDFVDIMLGFVGTEESEYRIERPNIKAILLWRTPRSGEVEALCLTIKKVALPPATIEPLQSRAMPHWFGLPPPRVFCAFTVAAIAFPLRASSTTAFMATMNGWKEEGRAQWSWWCTVLKKH 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi180g00042 382 PANTHER CYTOCHROME P450 93A3-LIKE 3 291 - -
Sebi180g00042 382 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi180g00042 382 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi180g00042 382 SUPERFAMILY Cytochrome P450 18 289 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi180g00042 382 Gene3D Cytochrome P450 15 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi180g00042 382 Pfam Cytochrome P450 27 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi180g00042 Sebi-Chr180 417546 422947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi180g00042 1 291 Cytochrome P450 AT3G48280 36.519 3.91e-59 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi180g00042 K20562 - pvu:PHAVU_002G263800g 463.381