Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi180g00035 ATGGAGTATGGACACTGGGTGGAAGAGCAAAATAAACAAATCTTGGACTTGAGAAGTGCTTTAAATGCTCATATCAGTGACACACAGCTCGAGACACTTGTACATGGCATCATGAACCACTACTTCAAACTCTTCTGCATGAAATCTACTGCTGCAAAAGCTAATGTTTTCTATGTTAAATATGGTTTGTGGAAAACGGCAGCTGAACGGTTTTTCTTGTGGATTGGAGGCTTTCGCCCATCTGAACTTCTAAAGGCTCTGGTCCCTTTGATAGAACCATTAACAGAGCAACAACGGTTTGATGCGTGTAACCTTGAAAAATCATGCCAACAAGCAGAAGATGCCCTTTCACAAGGCATGGAAAAACTCCAGCACTTACTTGCTGAAGCTGTAGCAGCAGGACAAGTCATTGAAGGAACCTATATTCCACAAATGACTATTGCAATGGAGAGGTTGGAAGCTCTTGTGAGCTTTGTGAACCAGGCTGATCATCTACGACAGGAAGCCTTGCAACAAATGTCTCGAATACTAACCATACGTCAAACTGCTCGATGGTTACTTGCTTTGGGGGAATATTTTCAACGCTTGAGGGCTTTGAGCAAACTCTGGGCCAATCGTCCTCGTGAACCTGCTTAG 636 0.4355 MEYGHWVEEQNKQILDLRSALNAHISDTQLETLVHGIMNHYFKLFCMKSTAAKANVFYVKYGLWKTAAERFFLWIGGFRPSELLKALVPLIEPLTEQQRFDACNLEKSCQQAEDALSQGMEKLQHLLAEAVAAGQVIEGTYIPQMTIAMERLEALVSFVNQADHLRQEALQQMSRILTIRQTARWLLALGEYFQRLRALSKLWANRPREPA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi180g00035 211 Coils Coil 109 129 - -
Sebi180g00035 211 ProSiteProfiles DOG1 domain profile. 1 206 IPR025422 GO:0006351|GO:0043565
Sebi180g00035 211 PANTHER TRANSCRIPTION FACTOR TGA9 1 209 - -
Sebi180g00035 211 Pfam Seed dormancy control 15 88 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi180g00035 Sebi-Chr180 382682 383945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi180g00035 1 211 Calmodulin-binding Proteins AT5G10030 73.934 7.86e-114 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi180g00035 K14431 - gmx:100808443 337.035