Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi180g00034 ATGCAGATACAACGACGTCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTTTGAGGAAAAAGGCCTATGTACAGCAATTAGAATCATGCCGTACAAAGCTGATGCAGTTAGAGCTAGAGGTGGATCTTGCAAAACAACAGGTGTGGTGA 153 0.451 MQIQRRLAQNREAARKSRLRKKAYVQQLESCRTKLMQLELEVDLAKQQVW 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi180g00034 50 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 5 20 IPR004827 GO:0003700|GO:0006355
Sebi180g00034 50 FunFam BZIP family transcription factor 1 50 - -
Sebi180g00034 50 Pfam bZIP transcription factor 4 31 IPR004827 GO:0003700|GO:0006355
Sebi180g00034 50 SUPERFAMILY Leucine zipper domain 4 45 IPR046347 GO:0003700|GO:0006355
Sebi180g00034 50 Coils Coil 21 48 - -
Sebi180g00034 50 Gene3D - 2 50 - -
Sebi180g00034 50 PANTHER TRANSCRIPTION FACTOR TGA9 2 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi180g00034 Sebi-Chr180 381792 382012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi180g00034 2 50 Calmodulin-binding Proteins AT5G65210 77.551 6.71e-18 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi180g00034 bZIP_1 1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi180g00034 K14431 - gmx:100808443 79.7221