Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi180g00018 ATGTCTATGTCAACCATTGAGACCTGCAAAGCAGAGGATCCGGTGGTGATGGACAACACTGAGAATGGTCAACAACATTCTGAAAAGTCTCAGTGGGTGCTCAATGCTCCTGATCCCCCAACTCCATGGCATGAACTTATTGGTTCTGTGAGGAACACCATTTCAAAGTACCAAGAAAAGTTCTCTTCTCTCAGAGGCCAACAAGGACCTCAAATTGTCCTTTCCTTCTTAAGAGGCATTTTTCCTATTCTTGATTGGGGCCGAAATTATACAGTAACCAAATTCAGAAACGATTTACTTGCAGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGAGCATTGGGTATGCCACTTTAGCAAAGCTTGATCCTGAATATGGTCTCTATACAAGTGCGGTGCCACCTCTTATCTATGCTTTAATGGGAAGTTCAAGAGAAGTAGCAATTGGACCTGTGGCCGTGGTATCTCTTTTGTTGTCATCAATGATTCAGAAATTAACAGACCCTGCTGCTGATCCAATTGGTTACAAAAAGCTTGTTTTCACTGCCACTTTATTTGCTGGTATGTTTCAAGCTGCGTTTGGACTCTTGAGGTTGGGGTTTTTTGTTGATTTTCTCTCCCATGCTGCTATTGTGGGATTCATGGGGGGAGCAGCTATAATAATCGGTCTTCAACAGCTGAAGGGCCTATTTGGGATCGAACATTTTACCAACAAAACTGACGTGATCTCTGTTATGGAATCAGTTCATCATCCCTGGAACCCTCGCAATTTTGTCCTGGGATGTACATTCTTCATCTTCATCCTTTTTACCAGATTTCTGGGTAAAAGGAATAGGAAACTGTTCTGGCTGCCAGCAATATCCCCTTTGCTATCAGTTCTGTTATCAACTCTCATTGTTTTTCTGACACGAGCTGATAAAAGTGGAGTTAATATTGTCAAACATATAAAAGGTGGATTTAATCCAAGCTCTATCCATGAGATAGAGTTGACTAGCCCCCATGTTGGAGCATTAGTCAAAATTGGACTAATTGCTGCTGCTGTTGCACTCACTGAATCAGTTGCTGTTGGCCGTTCTTTTGCATCCATGAAAGGATATCACCTAAATGGAAACAAGGAAATGGTGTCATTAGGCTTCATGAACATCATAGGATCCTTAACCTCTTGTTATGTTGCAACTGGTTCTTTCTCCCGCACAGTGGTTAATTTCACTGCTGGTTGTGAAACATTAGTGTCAAACATTGTGATGGCTATTACAGTGATCATATCCCTGCAATGTTTTACAAAGCTGTTGTATTTTACCCCAACAGCAATTCTTGCTTCAATAATCCTTTCAGCTCTCCCTGGACTCATAGACATCAATGAAGCTTACAAAATATGGAAAGTTGATAAGCTTGATTTCCTTGCTTGTCTTGGAGCCTTCTTGGGGGTATTGTTTGCATCTGTTGAAATTGGTCTTCTAGTGGCAGTGGCAATATCTTTTACAAAGATTATTTTGATCTCTATTAGACCAGGCACAGAAACTCTGGGAAGAGTTCCCGGCACAGATGTGTTCAGTGATCTCCATCAGTATCCTATGGCTGTTAAGACTCCAGGGGTTGTAATAATACGCATCAAGTCTGCATTGCTTTGCTTTTCTAATGCCAATTCAGTCAGAGAAAGAATTCTGAGATGGATCACTCAGGAAGAAGCAGAGGGGAACAAGAACAAAGAAGACACCACCAGTAACATAATTCAACTCGTAATACTTGACACCTCAAATTTGGTGAGCATTGACACCTCGGGAATTGCTTCTCTAGAGGAACTGCATAAGAGTTTAGTCTCAAGTGGGAAACAGTTAGCAATTGTCAACCCTCGGTGGCAAGTGATTTACAAGCTAAAAGTGACCAACTTTGTCAAGAAAATTGGAGGACGGGTCTTCTTGACTGTTGGAGAAGCTATTGATTGCAAGCTCGATGTCTAA 1962 0.4154 MSMSTIETCKAEDPVVMDNTENGQQHSEKSQWVLNAPDPPTPWHELIGSVRNTISKYQEKFSSLRGQQGPQIVLSFLRGIFPILDWGRNYTVTKFRNDLLAGLTIASLCIPQSIGYATLAKLDPEYGLYTSAVPPLIYALMGSSREVAIGPVAVVSLLLSSMIQKLTDPAADPIGYKKLVFTATLFAGMFQAAFGLLRLGFFVDFLSHAAIVGFMGGAAIIIGLQQLKGLFGIEHFTNKTDVISVMESVHHPWNPRNFVLGCTFFIFILFTRFLGKRNRKLFWLPAISPLLSVLLSTLIVFLTRADKSGVNIVKHIKGGFNPSSIHEIELTSPHVGALVKIGLIAAAVALTESVAVGRSFASMKGYHLNGNKEMVSLGFMNIIGSLTSCYVATGSFSRTVVNFTAGCETLVSNIVMAITVIISLQCFTKLLYFTPTAILASIILSALPGLIDINEAYKIWKVDKLDFLACLGAFLGVLFASVEIGLLVAVAISFTKIILISIRPGTETLGRVPGTDVFSDLHQYPMAVKTPGVVIIRIKSALLCFSNANSVRERILRWITQEEAEGNKNKEDTTSNIIQLVILDTSNLVSIDTSGIASLEELHKSLVSSGKQLAIVNPRWQVIYKLKVTNFVKKIGGRVFLTVGEAIDCKLDV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi180g00018 653 CDD STAS_SulP_like_sulfate_transporter 524 641 - -
Sebi180g00018 653 FunFam Sulfate transporter 31 503 652 - -
Sebi180g00018 653 PANTHER SULFATE TRANSPORTER 62 648 IPR001902 GO:0016020|GO:0055085
Sebi180g00018 653 Gene3D STAS domain 503 651 IPR036513 -
Sebi180g00018 653 ProSiteProfiles STAS domain profile. 543 650 IPR002645 -
Sebi180g00018 653 SUPERFAMILY SpoIIaa-like 528 648 IPR036513 -
Sebi180g00018 653 Pfam Sulfate permease family 95 471 IPR011547 GO:0016020
Sebi180g00018 653 MobiDBLite consensus disorder prediction 1 28 - -
Sebi180g00018 653 NCBIfam sulfate permease 82 640 IPR001902 GO:0016020|GO:0055085
Sebi180g00018 653 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Sebi180g00018 653 Pfam STAS domain 524 646 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi180g00018 Sebi-Chr180 228594 234183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi180g00018 21 648 Inorganic Solute Cotransporters AT5G10180 65.823 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi180g00018 K17469 - gmx:100775538 1053.89