Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi17g00117 ATGGGAAATTTAGAAAATGAATGTGATAATGAAGAAATAGAGACACCAATAATTGTGACTAAGCAACAATATCAATATAAGCCGAAAATTGGCATGATATTTTCAAATGAAGCTAAAGCATATAAGTTCTACAATGAGTATGCTAAATTCATCGGGTTTACTGTGAGAAAAAACCAATACCAAAGATTGGCAGATGGAACTCTAAAGCAGAGGACATTTGTTTGTGGAAAAAAGGGACATAGAAAGCCAAAGGACCCTTCACATGTGAGCAAGATTAATAGGAAAGAAACAATAACGGGTTGTCCAACTATGATATGCTTTACAATTGAAAAGGACAGATCATAA 345 0.3362 MGNLENECDNEEIETPIIVTKQQYQYKPKIGMIFSNEAKAYKFYNEYAKFIGFTVRKNQYQRLADGTLKQRTFVCGKKGHRKPKDPSHVSKINRKETITGCPTMICFTIEKDRS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi17g00117 114 Pfam FAR1 DNA-binding domain 42 111 IPR004330 -
Sebi17g00117 114 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi17g00117 Sebi-Chr17 3219814 3220158 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi17g00117 FAR1 2.3e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi17g00117 - K17604 qsa:O6P43_013220 110.923