Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi17g00085 ATGGTCTTCAAAGGAAGGTTCTTCTCTTCCAAAAAATCCGATTCTTCTAACAGCCCCGATGCTTCCTCCAATAGCCCTCGATCATTCTCCTCTAACTCTCCATCCAGATCCGACAAGAAAAAGTCCAAATCCGCCGCCAATCAAACCCTAACTGCCGCCGCCGCCGGAGGATTCGGAGCCGCCGTCGCTTGCCGCCAGGCGCAAGTTAAGGACGGGACCAAGAAGAAGGATGTTGCCAAGGGCAAAGAAAGTCAAACTCCGCCGGAGTCTCGCCCCGCCGCCGGAAAAGACTCCGGTTCGAGTTCAGCGTTGAAGAAGTTGACGGCATCGACGGCGGCGGTGGCAGCGGAGGGTAAGGAATTGCCGTCTTCTTCTTCGGTTTCGCCGATTCTGGCCTCGTCGCTTGGTTTGAACAGGATAAAGACGAGATCGGGGCCGTTGCCGCAGGAGAGCTTCTTCGGGTTCAGGGGCGATAAGGGTGCTGCGGCGGCGCTAGGCGCCAGTAACCTCTCGAGGCCCGGTGGTGTGAGTGGTGGCAAGAAGAAGGAGGTGGTGAACCAGAACAGAGTAGGGTTTCACGAGGGTTTCGGCACCGGCACCGGAGGTTGGGTTGATAATGGGAGCAATTCGGATAGCATGTCGACGGGGAGTGGTGCACCGTCGAGGGAACAGAGTCCGATTGTGTTGGCGCGGTCGCGGCTACAGAATGGAGAATCATCCTCCGAAGCAGGGAAGCAGGCATCATCACAGGCTCAGACTGGAGGCTTAAGAAGTGCAGATCTTTGTACTCCAGAGACAGCCTATGATTTTGAAAATCCGAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCACCCAGAAAGAGGTTTCCTGCGGATATCAAGAGCTTTTCCCATGAGTTAAATTCCAAAGGTGTCCGGCCTTATCCATTTTGGAAGCCTCGAAGGTTAAATAACCTTGAGGAGATCTTGGTTGTTATTAGGGCCAAATTTGATAAAGAAAAGGAAGCCGTAAACTCTGAGCTGGCTATTTTTGCAGCAGACCTGGTTGGAGTTCTTGAAAAAAATGCTGATACTCATCCTGAATGGCAAGAGACAATTGAGGACTTGCTAATTTTGGCTAGGCGCTGTGCTATGACCTCACCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGATTTGGATGATAGGCGTCAAGAGCTTCCTCCAGGGATGCTAAAGCAGCTTCACACTAAAATGCTTTTCATTCTCACAAGGTGTACTAGATTGTTGCAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACATGTTTTTAATCTCCGTCAATCTAGAGTCTTGCATTCTGCTGAAAAATGTATTCCTCCTGCTGTGGGAAGGGATACTAAAAGTTCTAGTGCTGCAAAGACCTTGAAAGCTTCAACAAAAAAAGCATACAGTCAAGAGCAGAGTATCTTGGGTTGGAAGAAAGATGTTATGCAACATGAAAATGCATTGCTTCATGCTGATGATGACACTTCAAAACACTTTGAGTCTCCTTCTGGCAGGGATCGGATGGCCTCTTGGAAGAAATTTCCATCTCCATCAGGAAGAAGCCCAAAAGAAACTGCTCAGTTGAAGGACCAAAATTATGGGAGGGTTGAACCTTCAAAGGTGTCAAATAATAAGAGATTCACTTCTGATGTGGATCTCTCTGTTGCTAAGCCATCTGAGCTTCTTCCTATCAAAGATCCCCTGGACCATGCTTCCAAACACCAACATAAAGTTTCCTGGGGCTACTGGGGTGATCAACCAAATAACAGTGAAGAGAGTTCAATAATTTGTCGTATATGTGAAGAGGAAGTACCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGACAGATGTGATCAGAAGGGTCTGAGTGTAAATGAGCGTCTTGTCAGAATTGCAGAAACACTAGAAAAGATGATGGAATCATCTACACAGAAGGATACCCATCAAATAGTGGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCAAGCATGACTGAAGAATCTGATGTTCTTTCACCTAAACTTAGTGACTGGTCTCGCAGAGGCTCAGAGGATATGCTAGACTGTTTACCTGAAACTGATAATTCTGTTTTTATGGATGACCTAAAGGGATTGCCACTTATATCATGTAAAAATCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCTGGAAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGATTGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTCCCACAGATGAATGAACTTGCTGATATAGCACGGTGTGTAGCAAATGCGCCTCTGGATGATGATCGCACAACGTCGTATTTATTATCTTGTCTTGATGACTTGCGGGTTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGCATTGAGAAGCTGATAAGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTTGAAAAGATAGATGTAGAGAGCACTGTAATGGATGATGATGTTCTCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAGAGAACTACTGGGGATCTTTTTGCAATAAAGGTTCTCAAAAAGGCAGATATGATTCGTAAGAATGCTGTGGAAAGTATATTAGCTGAACGTGATATCTTAATCACAGTGCGCAATCCTTTTGTGGTTCGATTTTTCTATTCTTTTACATGTCGTGAGAACTTGTATCTTGTCATGGAGTATCTGAATGGAGGTGACCTGTATTCATTATTAAGGAATTTAGGTTGTCTAGATGAAGAAGTTGCTCGTGTATATATGGCTGAAGTGGTGCTTGCATTAGAGTATTTGCATTCACTGCGTGTGGTTCATCGTGACTTAAAGCCTGACAATTTATTGATTGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGATTTGGCTGGTCCAGCAGTGAGTGGTACATCCCTACTTGGGGAGGATGAACCTCCTGTATTTACATCTGAGGATCAAAGGGAACGGAGGAAGAAACGTTCTGCTGTGGGCACACCTGATTACTTAGCACCAGAGATACTTTTGGGAACTGGACATGGGTATACTGCCGATTGGTGGTCTGTCGGGGTCATTTTATTTGAGTTGCTTGTCGGTATTCCACCTTTCAATGCTGAACATCCTCAGACTATATTTGATAACATTCTTAATCGAAAGATACCTTGGCCTGCCGTTCCAGAAGAAATGAGTGCTGAAGCACAGGATCTTATTGATCGATTATTGATAGAAGATCCAAACCAAAGACTAGGAGCCAGAGGGGCATCAGAGGTGAAGCAACATGTTTTCTTCAAGGATATTAACTGGGACACACTTGCTAGGCAGAAGGCTGCATTTGTTCCTGCTTCTGAAAGTGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTAGTGATGGCCTTGTATATCCAGCAAGTGATATTGAAGATTCTAGTGATGCTGATAGTTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTAGTTCATCTGTAAATTACTCTTTTAGTAATTTCTCCTTCAAGAATCTTTCCCAGCTTGCATCAATCAATTATGATCTCACCAAAGGATGGAAAGATGATCCGTCTACAAATTCTAGTGCATAG 3924 0.4483 MVFKGRFFSSKKSDSSNSPDASSNSPRSFSSNSPSRSDKKKSKSAANQTLTAAAAGGFGAAVACRQAQVKDGTKKKDVAKGKESQTPPESRPAAGKDSGSSSALKKLTASTAAVAAEGKELPSSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGAAAALGASNLSRPGGVSGGKKKEVVNQNRVGFHEGFGTGTGGWVDNGSNSDSMSTGSGAPSREQSPIVLARSRLQNGESSSEAGKQASSQAQTGGLRSADLCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPADIKSFSHELNSKGVRPYPFWKPRRLNNLEEILVVIRAKFDKEKEAVNSELAIFAADLVGVLEKNADTHPEWQETIEDLLILARRCAMTSPGEFWLQCESIVQDLDDRRQELPPGMLKQLHTKMLFILTRCTRLLQFHKESGLAEDEHVFNLRQSRVLHSAEKCIPPAVGRDTKSSSAAKTLKASTKKAYSQEQSILGWKKDVMQHENALLHADDDTSKHFESPSGRDRMASWKKFPSPSGRSPKETAQLKDQNYGRVEPSKVSNNKRFTSDVDLSVAKPSELLPIKDPLDHASKHQHKVSWGYWGDQPNNSEESSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESSTQKDTHQIVGSPDVAKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCLPETDNSVFMDDLKGLPLISCKNRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDVESTVMDDDVLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYMAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLAGPAVSGTSLLGEDEPPVFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPAVPEEMSAEAQDLIDRLLIEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDIEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA 1307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi17g00085 1307 CDD STKc_MAST_like 902 1190 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 1070 1085 - -
Sebi17g00085 1307 PANTHER SERINE/THREONINE-PROTEIN KINASE 594 1280 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 739 760 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 1 48 - -
Sebi17g00085 1307 SUPERFAMILY Protein kinase-like (PK-like) 893 1224 IPR011009 -
Sebi17g00085 1307 ProSiteProfiles AGC-kinase C-terminal domain profile. 1186 1290 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 510 525 - -
Sebi17g00085 1307 Gene3D Transferase(Phosphotransferase) domain 1 980 1203 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 510 560 - -
Sebi17g00085 1307 SMART serkin_6 896 1185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 9 33 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 192 258 - -
Sebi17g00085 1307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1015 1027 IPR008271 GO:0004672|GO:0006468
Sebi17g00085 1307 Gene3D Phosphorylase Kinase; domain 1 894 1214 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 202 258 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 69 84 - -
Sebi17g00085 1307 ProSiteProfiles Protein kinase domain profile. 896 1185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi17g00085 1307 Pfam Protein kinase domain 896 1185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi17g00085 1307 FunFam probable serine/threonine protein kinase IREH1 894 983 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 681 700 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 681 695 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 66 129 - -
Sebi17g00085 1307 MobiDBLite consensus disorder prediction 1057 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi17g00085 Sebi-Chr17 2554338 2571481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi17g00085 1 1301 AGC Kinase Gene Family AT3G17850 66.540 0.0 1659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Sebi17g00085 Pkinase 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi17g00085 - - gmx:100776995 2113.19