Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi17g00024 ATGGATGGTGACAATGGTCTTAACATACGAAATTGGGGTTACTATGAACCTGCTACCTCCTTTAAGAGCCATCTGGGGCTGCAGCTGATGTCTTCCATGCCAGAAAAACCTCTGCTTGGAGGACGCAATGCCGCAGTTTTGTCTGGTACTAATGGGGCATTTCACCATAGGGACATTGGGATGCCCCAAGCTACATACCCTATGGATTATATGAGGGATGCATGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCCTAATTATGGTGCTATTCCGGAGACATCTTCAGCACATCATATTCAAATGATTCAACAACCTGAGTTGCCAAAGGAAGAAAGGCCAATGGAAGAGGCACCTGTTGTTGAGAAGCCAAACAACACGGGTAAGAAAAGGCAGGGGCAAAAGATGCTCAAATCCCCCAAGGCAAAGAAGCCTAAGAGGGGCCCTCGCGTGCCAAAGGATGAGAATACACCTTCAGTTCAACGGGCCAGGGTTCCGAAGAAAACTACTGAAATTGTTATAAATGGGATTGATCTGGATATTTCCAGTATTCCAATTCCTGTTTGTTCCTGCACTGGGACACCTCAACAGTGTTATAGATGGGGCTCTGGTGGGTGGCAGTCTGCATGCTGCACAACAGGCATGTCAATGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGCGCTAGGATAGCTGGGAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAGGGTTATAACTTTACTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGGTAG 849 0.4523 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGGRNAAVLSGTNGAFHHRDIGMPQATYPMDYMRDAWISSQREKYMNMIPTNPNYGAIPETSSAHHIQMIQQPELPKEERPMEEAPVVEKPNNTGKKRQGQKMLKSPKAKKPKRGPRVPKDENTPSVQRARVPKKTTEIVINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFTNPIDLRTYWAKHGTNKFVTIR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi17g00024 282 SMART GAGA_bind_2 1 282 IPR010409 -
Sebi17g00024 282 MobiDBLite consensus disorder prediction 113 172 - -
Sebi17g00024 282 PANTHER - 1 282 IPR010409 -
Sebi17g00024 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi17g00024 Sebi-Chr17 691984 692832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi17g00024 1 282 BBR or BPC Transcription factor family AT2G01930 52.174 2.34e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Sebi17g00024 GAGA_bind 2.1e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi17g00024 - - gmx:606296 515.383