Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi17g00010 ATGCAGATGGAGAAGACGAGAGGGGTGAGAAAAGGCGCATGGACATATGAGGAAGACAACCTGCTCAAGGCTTGCATTAACAAGTATGGGGTAGGAAAATGGCATTTAGTTCCTGAAAAAGCAGGATTGAATAGGTGCCGGAAAAGTTGTAGATTAAGGTGGTTGAATTATTTAAATCCCAACATCAACAGAGCAAGCTTTGCTGAGGATGAAGTTGATATGATTCTAAGGTTACATAATCTCCTAGGGAACAGGCTTCCGGGTAGGACAGCTAACGATGTGAAGAACTACTGGCACGCACACTTGAGCAAGAAGAAGGTGACCTCTAACTATAACAAGGAAGACAAGAAAGAAAAACATAAACCAATAAAGGAAACGATGAAATTGAAACCTCATGAAATTATAAAACCTCGACCACGGACATTTTCAAATAATTCACAATGGTTGAAGGGGAAACAGATTCTTTCAAATAATGATGGTGTTATGCCTCTAGTGGCTTCAAATGATGATAATGTTACTACAAAGTGTGACACACAGACAACTATGCTCCCACATGGTGATGCACAAGCATCTCTTGGTAGTGCTCCACAATCTACAATGTGGTGGGAGAGTTTGTTAAATATCGATGACGACAATAATGTCGGCAATGAGAAAGTTGGTACATGCTCTTTATCAAGTGAGAATTCCATTGTGGAGTTTCCAAATGCGGGAAACTTCTTTACCCAAGGCGCCATTGGTGGTGACTGTTTATGGGATTCCGACTTTTGTGATTTCAATGATCTTTGGGATCTTTGA 795 0.4063 MQMEKTRGVRKGAWTYEEDNLLKACINKYGVGKWHLVPEKAGLNRCRKSCRLRWLNYLNPNINRASFAEDEVDMILRLHNLLGNRLPGRTANDVKNYWHAHLSKKKVTSNYNKEDKKEKHKPIKETMKLKPHEIIKPRPRTFSNNSQWLKGKQILSNNDGVMPLVASNDDNVTTKCDTQTTMLPHGDAQASLGSAPQSTMWWESLLNIDDDNNVGNEKVGTCSLSSENSIVEFPNAGNFFTQGAIGGDCLWDSDFCDFNDLWDL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi17g00010 264 SUPERFAMILY Homeodomain-like 8 98 IPR009057 -
Sebi17g00010 264 Gene3D - 11 63 - -
Sebi17g00010 264 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Sebi17g00010 264 FunFam Myb transcription factor 11 63 - -
Sebi17g00010 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 106 IPR017930 -
Sebi17g00010 264 SMART sant 10 60 IPR001005 -
Sebi17g00010 264 SMART sant 63 104 IPR001005 -
Sebi17g00010 264 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 169 - -
Sebi17g00010 264 Gene3D - 66 130 - -
Sebi17g00010 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 62 IPR017930 -
Sebi17g00010 264 CDD SANT 13 58 IPR001005 -
Sebi17g00010 264 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi17g00010 Sebi-Chr17 245132 246901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi17g00010 4 209 MYB Transcription Factor Family AT1G66370 46.512 8.11e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi17g00010 Myb_DNA-binding 8.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi17g00010 - K09422 tpra:123921946 262.692