Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi179g00035 ATGGGTGATAACACTGAATCTAGATGTGGTGAAAGCTCTGTTTTTAAGGGTTGGGAAGATTGCATATACTATATAGAAGAGGATAAGGAAATCCCTACTGGATATTTAAACCGTGATGGTTACTTCATTGATGATTTAGGTGGGGGTGTTTTACTTATTGACGATGAGGATGACAGAGATGGGGATGAAGACGAATATTGGGATGAGCCTTCTTTTGATGGTGGTGATTTTGGTGATAGGCCGCCCAGAATTAGTATTGATTGTGAGAATGATATTAAAAACATGGACTTGAAGGCATTTAGTCAACATGAAATTGTAATGTATGATTTTGAGAGTATGGAAATAGTGTACAAATTCTACAACTCCTATGCATTGCACAATGGTTTTTGTGCTAGGAAATCTTCAATTGTGAGAAGTAAAAACACTAATGAGCCATATCAGCAAGAGTATGTTTGCAATAGGGAAGCTAAAAGACGTAGTAATGGCAAAACGGTGGCGGAGTTGAAACGTGAACCGAGGGTTGATTTTAGGTCGTTTGCTTTGCAAGCGAGGGGTTATCAGAAAATTGGATTTAAGAAGAAGGATTTTTATAACCAGATTCATAGGCAAAGGCGTGAGCAAGCCTCAGATGTTGTGGCTCCTTTGAGATACTCGCATGACATGTGGTCCAGGGATCCTATGATGTACTTTGAGCATACAGTTGACACCGAGTTAAAGAAGTGCCTGATGGGGGACAACGATTTGGCTGAGTTCCAACAATTGTGGGATAAAATGGTTTGTAGAACAACTTCTAGATGTGAGGGGTTGCACTCGGAATTGGCTAAGTTTGTGCATTCAAGGTATAATTTGACAGATTTCTTGCATCATTTTCAGCAATGTGTAGAGCAAATGAGATTTAGGGAAAAAGAAGATGATTTTGCTTCTTTACATGGGGACCCGGTTCTTCAAACAGACTTCCATAGCATTGAGAGGTCTGCTGCGAAATACCTTACAAAGAAGGTGTTCTACATTTTTCGAAGCATTATGAATAGGGCAAGTGACATTCAAGTGGTTGGTTGTACGAAGACACTAACAATTTTGATATACAATGTTTGTAAGCGTCATGGGGGAGGGAAGGAGTGGCAGGTAACTCAAAACCCTATTAGTAATGATTTTAAATGTATTTACATGAGAATGGAGTCACGGGGTTTGGCATGTGAGCACATTATTGCGGTTCTAGGTCATTTGAGCATTCTTAACCTTCCAAGGTGGTTGGTGTTGAAAAGATGGTCAAAAGGTACAAAGGATGGTGTGCAATATTATAATGGTGATGGAAACAATTCTTGGAATGCATCAAAGTCTGCTACGGTTGATGACTTGATGTATCTATTTAGTGTTTTGGAAAGGTTGAGCAATGATACTGTAGATGAATACAACAAGTTTCAGGAGAAGACTTTAGAAACCATTGCAGAAAGCAGGGCAAGGAAAGCAAGTGTTATTGGAGAAGGTAGTTCAACCGGTCATGGGCTGGAGAGTTTGAGGGATCCTGTGAGAGGAAGGCCTAAAGGTCGTGGTGGGGGTAAATCCACAACTTCTGGTATAGCAGTGCGAAGGAGGAAAAAATGCTTTGTATGTAAGGTACCCGATCACAATAGGTTGATCTGTCCCCAAATTCAAAGTGAAGTACATAGGGGAGAAGACGGTACTGGACATACGCAAGAGGGAGATGATGAGCTGTATTACCCCACGCATGATTTGGACGGAAACAATGTGAGTATAAAACTGTAA 1767 0.4052 MGDNTESRCGESSVFKGWEDCIYYIEEDKEIPTGYLNRDGYFIDDLGGGVLLIDDEDDRDGDEDEYWDEPSFDGGDFGDRPPRISIDCENDIKNMDLKAFSQHEIVMYDFESMEIVYKFYNSYALHNGFCARKSSIVRSKNTNEPYQQEYVCNREAKRRSNGKTVAELKREPRVDFRSFALQARGYQKIGFKKKDFYNQIHRQRREQASDVVAPLRYSHDMWSRDPMMYFEHTVDTELKKCLMGDNDLAEFQQLWDKMVCRTTSRCEGLHSELAKFVHSRYNLTDFLHHFQQCVEQMRFREKEDDFASLHGDPVLQTDFHSIERSAAKYLTKKVFYIFRSIMNRASDIQVVGCTKTLTILIYNVCKRHGGGKEWQVTQNPISNDFKCIYMRMESRGLACEHIIAVLGHLSILNLPRWLVLKRWSKGTKDGVQYYNGDGNNSWNASKSATVDDLMYLFSVLERLSNDTVDEYNKFQEKTLETIAESRARKASVIGEGSSTGHGLESLRDPVRGRPKGRGGGKSTTSGIAVRRRKKCFVCKVPDHNRLICPQIQSEVHRGEDGTGHTQEGDDELYYPTHDLDGNNVSIKL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi179g00035 588 Pfam FAR1 DNA-binding domain 118 167 IPR004330 -
Sebi179g00035 588 PANTHER OS01G0519700 PROTEIN 232 430 - -
Sebi179g00035 588 MobiDBLite consensus disorder prediction 557 576 - -
Sebi179g00035 588 MobiDBLite consensus disorder prediction 556 577 - -
Sebi179g00035 588 MobiDBLite consensus disorder prediction 490 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi179g00035 Sebi-Chr179 1493744 1497893 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi179g00035 FAR1 4.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi179g00035 - - tpra:123913749 229.18