Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi179g00007 ATGTTGCCATCATCAAATAGCAAGGGGGAATGCAACTGCAGCGGCAACAACAAAGATGTAAATTTCCAAGACTTTCTCACTCCACCCTTGAATTTCACCATAGCTATAGACCCACCAACCACCAGCACTGTCTCCTCTTCTCCCTCAAACACATCATCTTCTCTTCACTCCCCTCTCACTGCCCTCAGCTTGAGCTCACACCATTTTGAACCTCTTAGCCACAAGGACTTGCAATTAGCACAGCCCCATGCTTCAAAGGTGGATCCTTTATGCAACCCATTTCAGAGCCAACTGGTTCATGACTCTTGTGACTCTCTGTCCTCTTTTGGGAACAAGAGATTTCTTGAATCTGATGACGGCAACTCAAGGGACAGGAGAACTAAGCGAATGATGAAGAACAGAGAATCTGCTGCCCGATCAAGAGCCAGAAAGCAGGAAAATATTGCTTACACATTTGAGTTGCAGCAAAAAATTGAGCTCTTGTTAGCAGAGAACGCCAGACTCAGAACACAGCACCAAAGGTTGTTGTGTGATGCTGCAGCCAATCAGCAGCAGAACAAGAAAGGCAGTCTATATCGAACATCTACAGCTCCATTTTAA 600 0.455 MLPSSNSKGECNCSGNNKDVNFQDFLTPPLNFTIAIDPPTTSTVSSSPSNTSSSLHSPLTALSLSSHHFEPLSHKDLQLAQPHASKVDPLCNPFQSQLVHDSCDSLSSFGNKRFLESDDGNSRDRRTKRMMKNRESAARSRARKQENIAYTFELQQKIELLLAENARLRTQHQRLLCDAAANQQQNKKGSLYRTSTAPF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi179g00007 199 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 128 143 IPR004827 GO:0003700|GO:0006355
Sebi179g00007 199 MobiDBLite consensus disorder prediction 114 139 - -
Sebi179g00007 199 Pfam bZIP transcription factor 123 175 IPR004827 GO:0003700|GO:0006355
Sebi179g00007 199 SMART brlzneu 121 188 IPR004827 GO:0003700|GO:0006355
Sebi179g00007 199 SUPERFAMILY Leucine zipper domain 125 175 IPR046347 GO:0003700|GO:0006355
Sebi179g00007 199 CDD bZIP_plant_BZIP46 125 183 - -
Sebi179g00007 199 Gene3D - 124 180 - -
Sebi179g00007 199 MobiDBLite consensus disorder prediction 116 139 - -
Sebi179g00007 199 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 198 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi179g00007 Sebi-Chr179 415556 416811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi179g00007 22 146 bZIP Transcription Factor Family AT4G35900 43.704 4.98e-13 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi179g00007 bZIP_1 7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi179g00007 K14432 - gmx:102667912 125.561