Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi179g00004 ATGAGGGATGCTATCAAGGTTGATGGACTTCCTGAGCGCCTGCTGGCGGCGAAGATCGTCGGACCGCAAGGGTTCCGATGTTTCCGGGCGGAAGGAGGGGCTGCTGTGGCCAACAACTTGCTCGAGGATCAGAGCCAGATTGAGTCTGGTCCCCTTAGCTTCCTCGATACTGGTCCTTATGGTACTTTTGTTGGTGTGTATGATGGTCACGGTGGACCTGAGACATCGCGTTACATTTGTGATCACCTCTTCCAACATCTAAAACGATTTGCATCTGAGCAGAAGTCCATGTCTGTGGAGGTTATTCGGAAGGCGTACCAAGCCACAGAAGAAGGTTTTCTGTCAGTGGTTACCAAACTGTGGCCTATGAATCCCCAAATTGCTGCTGTTGGATCTTGTTGTTTGGTTGGTGTGATTTGTGGTGGTATCCTCTATATTGCTAACCTTGGTGATTCCCGTGCTGTGCTTGGGCGGGTTGTCAGGGCAACTGGGGAGGTTTTGGCGATCCAACTCTCGTCAGAGCATAATGTGGCCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCAGATGACTCAAAAATTGTGGTTCTGAAGCACAACGTGTGGCGTGTGAAGGGTCTGATACAGGTTTCTAGATCCATTGGGGATGTATACCTTAAAAAGGCAGAATTTAACAAGGAACCGTTGTATGCTAAGTTTCGTCTTCGGGAAACTTTCAAAAGGCCAATTTTGAGCTCTGACCCATCAATTTCTATTCATGAACTTCAACAGCATGATCAATTTCTGATATTTGCTTCGGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCACCCACACAGTGGAAGTGCTCGGAGGCTCATCAAAGCTGCTTTGCAGGAAGCAGCTAAAAAAAGAGAGATGAGGTACTCTGATCTGAAGAAAATCGACCGCGGTGTCCGCCGCCATTTCCACGATGACATCACAGTCATAGTTGTATTTCTTGACTCCAACCTTGTCAGTAGAGCCAGCACAGTAAGAGGTCCTCCTTTATCAGTGAGGGGAGGTGGTGTTCCCCTGCCTTCTAGAACTTTGGCTCCCTGTGCAGCACCTATGGAACTTAGTTCTGGTTGA 1140 0.4763 MRDAIKVDGLPERLLAAKIVGPQGFRCFRAEGGAAVANNLLEDQSQIESGPLSFLDTGPYGTFVGVYDGHGGPETSRYICDHLFQHLKRFASEQKSMSVEVIRKAYQATEEGFLSVVTKLWPMNPQIAAVGSCCLVGVICGGILYIANLGDSRAVLGRVVRATGEVLAIQLSSEHNVAIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNKEPLYAKFRLRETFKRPILSSDPSISIHELQQHDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASTVRGPPLSVRGGGVPLPSRTLAPCAAPMELSSG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi179g00004 379 FunFam Phosphatase 2C family protein 31 347 - -
Sebi179g00004 379 SUPERFAMILY PP2C-like 56 338 IPR036457 -
Sebi179g00004 379 Gene3D - 24 347 IPR036457 -
Sebi179g00004 379 ProSiteProfiles PPM-type phosphatase domain profile. 22 337 IPR001932 -
Sebi179g00004 379 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Sebi179g00004 379 Pfam Protein phosphatase 2C 62 306 IPR001932 -
Sebi179g00004 379 PANTHER PROTEIN PHOSPHATASE 41 335 IPR015655 GO:0004722|GO:0006470
Sebi179g00004 379 SMART PP2C_4 27 335 IPR001932 -
Sebi179g00004 379 CDD PP2Cc 61 337 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi179g00004 Sebi-Chr179 95213 103141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi179g00004 37 365 PP2C-type Phosphatase Gene Family AT3G51370 79.635 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi179g00004 K01102 - gmx:100777920 660.218