Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi178g00025 ATGGCTGGTTGTTCAAGAACTACCTCTGCTTCTCTTTTGCCTCCTATTTCTTCTCTTTGGCTTCTCCTGCAGCTAAGGAACTATTGGGAAGGTTACGCTAATTGCAACAGCCATCCAAGCCCCATTGAGAGGTACAGTGATGGGAACACTAAGGTGAAGCTAGACCGTCCTGGGCCATTCTACTTCATCAGTGGAGCAAAGGGTCACTGTGAGAAGGGACAAAAGGTGATTGTGGTGGTTGTGTCTCCAAAGCGCAGCAGATACATGGCAATTTCTCCTGCACCTTCTCCTAGAGTTTGA 300 0.48 MAGCSRTTSASLLPPISSLWLLLQLRNYWEGYANCNSHPSPIERYSDGNTKVKLDRPGPFYFISGAKGHCEKGQKVIVVVVSPKRSRYMAISPAPSPRV 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi178g00025 99 ProSiteProfiles Phytocyanin domain profile. 1 82 IPR003245 GO:0009055
Sebi178g00025 99 SUPERFAMILY Cupredoxins 29 81 IPR008972 -
Sebi178g00025 99 PANTHER BLUE COPPER PROTEIN 30 82 IPR039391 GO:0009055
Sebi178g00025 99 Pfam Plastocyanin-like domain 30 74 IPR003245 GO:0009055
Sebi178g00025 99 Gene3D - 22 86 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi178g00025 Sebi-Chr178 306240 306771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi178g00025 30 97 Phytocyanin Superfamily AT2G25060 64.706 9.73e-25 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi178g00025 - - tpra:123897354 106.301