Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi178g00008 ATGGGGTACAAAGACTATCGATTAATAACCAAGGACTCAACTTCCCGTTGTTTGTCAAGAACCATCTCTGAGAATAATGGGGTTCACGGCGGCGGAAGTACAGGCCACGACCTTCTAATATCACAATTGTACAAGGACCGCAAAATATCACACGCTCAGCAATGCTCCAGAACCAAGGGTCCTAGCCTCTCTTTCAACTTCTATGCAGCTTCATGCCCAACAGCAGAGCTTCTCATAAGAAACACAGTCAGTTCATCCACTTCTAATGATCCTTCCATTCCTGGAAAGCTCCTTCGCCTTGTTTTCCATGATTGCTTCGTGGAGGGTTGTGATGCATCTTTGATGCTACAAGGGAATAATACAGAACAAAATGATCCAGGGAATAGGTCTGTTGGAGGATTTTCAGTTATAGAATCAGCAAAAAGAGTCCTTGAATTTTTCTGCCCTGGAACTGTTTCTTGTGCAGACATAATTGCTCTAGCTTCTAGAGATGCTGTTGAAATTGCTGGTGGACCAAGGATTCAGATTCCTACAGGTAGGAGAGATGGGATGGTTTCAGTTGCTTCAAATGTCAGACCAAACATTGCGGACACCATCTTCACTATGGATGAGATGGTTAAGCTCTTTTCCACTAAAGGATTATCCTTGCTTGATCTTGTCGTCCTTTCAGGAGCTCATACCATAGGAACAGCTCATTGCAACACATTCAGGGGTCGTTTCCAAGAAGACTCAAATGGAAAGCTTAGGCTTATTGATCAAACCCTTGACAGTAGCTATGCTAATAAGCTAATAGAACAGTGTCCAGCAGATGCACTACCATCTGTAACAGTGAACAATGATCCTGAAACATCTATGGTCTTTGACAATCAGTACTACCGAAATCTTCTGGCTCACAAAGGGCTATTCCAGTCAGATTCTGTTTTATTAAACGATGATAGCACGAGGAAGATAGTGGAGGATTTTGCAAATGATCAAAACCTTTTCTTTGAAAACTGGGGTGTGTCCTTCATGAAGCTCACCAGTGTTGGAGTCAAAACAGGGGATGAGGGTGAAATTCGACGTACTTGTGCAGCAACTAATGCTTAA 1086 0.4282 MGYKDYRLITKDSTSRCLSRTISENNGVHGGGSTGHDLLISQLYKDRKISHAQQCSRTKGPSLSFNFYAASCPTAELLIRNTVSSSTSNDPSIPGKLLRLVFHDCFVEGCDASLMLQGNNTEQNDPGNRSVGGFSVIESAKRVLEFFCPGTVSCADIIALASRDAVEIAGGPRIQIPTGRRDGMVSVASNVRPNIADTIFTMDEMVKLFSTKGLSLLDLVVLSGAHTIGTAHCNTFRGRFQEDSNGKLRLIDQTLDSSYANKLIEQCPADALPSVTVNNDPETSMVFDNQYYRNLLAHKGLFQSDSVLLNDDSTRKIVEDFANDQNLFFENWGVSFMKLTSVGVKTGDEGEIRRTCAATNA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi178g00008 361 ProSitePatterns Peroxidases proximal heme-ligand signature. 218 228 IPR019793 -
Sebi178g00008 361 Pfam Peroxidase 80 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Plant peroxidase signature 132 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Plant peroxidase signature 217 229 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Plant peroxidase signature 96 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Plant peroxidase signature 278 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Plant peroxidase signature 294 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Plant peroxidase signature 170 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Plant peroxidase signature 72 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Plant peroxidase signature 334 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Plant peroxidase signature 151 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 FunFam Peroxidase 196 339 - -
Sebi178g00008 361 FunFam Peroxidase 66 206 - -
Sebi178g00008 361 SUPERFAMILY Heme-dependent peroxidases 63 360 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 ProSiteProfiles Plant heme peroxidase family profile. 62 360 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PANTHER - 59 360 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 CDD secretory_peroxidase 63 359 IPR033905 GO:0004601|GO:0042744
Sebi178g00008 361 Gene3D - 66 360 - -
Sebi178g00008 361 Gene3D Peroxidase, domain 2 196 339 - -
Sebi178g00008 361 PRINTS Haem peroxidase superfamily signature 280 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Haem peroxidase superfamily signature 218 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Haem peroxidase superfamily signature 94 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Haem peroxidase superfamily signature 152 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi178g00008 361 PRINTS Haem peroxidase superfamily signature 170 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi178g00008 Sebi-Chr178 151243 154256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi178g00008 58 360 Peroxidase AT4G31760 64.026 7.03e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi178g00008 K00430 K18328 gmx:102664900 507.294