Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi177g00074 ATGACTGTTGCTTGCCTGACTAGGGGAGCATATCCCACCAAGACTAATGACGGTGTTGACCTTGAAGGTCTACTACCTACAGAAGATGTCGCTTCTTCGAATGGAGCTGAGGGTGATTTGTCTGTTACAGAGGATTCAGATGAATTTTGGAAAGCATTTATTGAATCCTCAGCACTTAGGAAATCAATCAAATCTAACAATGGTTATGCTCCACAAAAGGAGAAGTCCCAGGTGAAGAATGATGGTTCAGAAGACGCTGAAGAATGCAAGTCTGAAAATACATCAAGTACTGAAGCCAAATCTTCAACATCAGTAAAGAGAAGAAACAAATGGAAAGAGGAGGAAGTTAAGAAGCTGATTGGTATGCGCTGGGAACTGAATGACAGATTTCAAGTCGTAAAGGGAAGGATGGGCCTCTGGGAAGAAATATCTCAGACCTTGTTGGCTAACGGGATCAGCAGAAACCCTGGGCAGTGTAAATCTATGTGGACATCTTTGGTACAAAAATATGAGGAGGTCAAGAATGAGAAGGATGGAAAGAAAAGTTGGCCATATCTTGAGGACATGGAGAGGATTCTGTCTGATAATGAGGCACTAGCAAAAAAATGA 609 0.4204 MTVACLTRGAYPTKTNDGVDLEGLLPTEDVASSNGAEGDLSVTEDSDEFWKAFIESSALRKSIKSNNGYAPQKEKSQVKNDGSEDAEECKSENTSSTEAKSSTSVKRRNKWKEEEVKKLIGMRWELNDRFQVVKGRMGLWEEISQTLLANGISRNPGQCKSMWTSLVQKYEEVKNEKDGKKSWPYLEDMERILSDNEALAKK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi177g00074 202 ProSiteProfiles Myb-like domain profile. 103 167 IPR001005 -
Sebi177g00074 202 MobiDBLite consensus disorder prediction 1 43 - -
Sebi177g00074 202 MobiDBLite consensus disorder prediction 64 108 - -
Sebi177g00074 202 Coils Coil 186 202 - -
Sebi177g00074 202 MobiDBLite consensus disorder prediction 77 94 - -
Sebi177g00074 202 Pfam Myb/SANT-like DNA-binding domain 108 192 IPR044822 -
Sebi177g00074 202 Gene3D - 111 172 - -
Sebi177g00074 202 CDD GT1 109 174 - -
Sebi177g00074 202 PANTHER RIBONUCLEASE J 14 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi177g00074 Sebi-Chr177 1373663 1375502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi177g00074 94 194 Trihelix Transcription Factor Family AT2G38250 32.692 7.83e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi177g00074 Myb_DNA-bind_4 3.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi177g00074 - - gmx:100814619 254.603