Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi177g00005 ATGGAAGATGAGTATCTTCGCACCCCAACAGAAGCAAAGGATTACTATTCTAGATCAATATGGTGGTCAGAAACTGCAAAGGCAGAGAGAAATGACAGAAATGGAGTTAATGGCATCTATTTAGCTGCTGGAAGAGATTACTACAGTTATAACTCCCAAGAAATAGCAACTCCTGAAGTTTCTAATACATATGAAGAACTCAAAGGTTTAACTAATACCAGAAACAGAATTGATGACATCTCGGAGGCTGGTGGTGAAGAAAACGGTGATTATGGCCAGTATTCTAGACAATTATTGTCAACAGAAATTGTGGAAATAGTTGAGGATGGCAAGAGCATAACAAGCAACAAAGATAGAGGAGTTGATGACCTTTATGTTGCCGTTGGAAAAGATGACTTGGATGTAGTGAAATGGGCTCTTGATCATGCAGTTTCTCCTGGTTCCCGGATTTTTCTTGTCCATGTTTCTCCTCCAATCACATTGATTCCTACGCCAGTTGGTAAATTTGAAAGAAGCCAACTGACCCCGCAACAAGTGAGACTATATGTTAATGAAGTGAACAACAAAAGGAAGGATCTTTTGCAGAAGTACATCCATCTTAGTACTGAAGCCAAGGTAACTACAGAAACATTGCTTCTGGAGAGCAGTGACACAGGAAAAGCCATTGTGGATCTTATCTCTATTCTTAACATTACCAACCTTGTCATTGGAATCAAAAAGCTACCTTACACACGGCGCAATAATAAATTGAGTAAAGGAGAGTTTGTAAAGAAAAATGCACCCAAGTCCTGTGATGTTACATTGGTTTACAATGGCGAGGTGTTTGTGTCTAACCCTTACGTGGGTGACTTGGCATCACATAGTAAAGGTCACTCAAAAAACAGCTTCTTTCAGTGTATGTGCTTTTCAGGCAAGTCCAGTTAA 924 0.3972 MEDEYLRTPTEAKDYYSRSIWWSETAKAERNDRNGVNGIYLAAGRDYYSYNSQEIATPEVSNTYEELKGLTNTRNRIDDISEAGGEENGDYGQYSRQLLSTEIVEIVEDGKSITSNKDRGVDDLYVAVGKDDLDVVKWALDHAVSPGSRIFLVHVSPPITLIPTPVGKFERSQLTPQQVRLYVNEVNNKRKDLLQKYIHLSTEAKVTTETLLLESSDTGKAIVDLISILNITNLVIGIKKLPYTRRNNKLSKGEFVKKNAPKSCDVTLVYNGEVFVSNPYVGDLASHSKGHSKNSFFQCMCFSGKSS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi177g00005 307 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 86 305 - -
Sebi177g00005 307 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 132 270 - -
Sebi177g00005 307 Gene3D HUPs 126 267 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi177g00005 Sebi-Chr177 92208 94028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi177g00005 119 272 U-box Gene Family AT2G45910 29.814 1.36e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi177g00005 - - pvu:PHAVU_003G204300g 444.891