Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi176g00045 ATGATCCTTAATTTTGGTCTTGTTTCTGCAGAAAATGTTCAATTCAAAAATGCTCTTATGCCCCCATGGGCTTACTTGAATCCTATTCTTCACCATACCAACCAGCACCAAACTACTCTGTCTCTGGCTCTAGGACTCACCCATGAGCCCTCTCAGAATATCACTACCTGGATCCAATCCAACATGAATGGTTATCAAGTTGCTACGATTCCTCAACCAGTACCTGAATCAAGCACATTCTTGCTTCCTCACGGTGTTAGACCTGAGGAGCCTTGGACTGAAACAGAACATCAGTTATTTTTGGCGGGGCTAATCATGTACGGAAAAGGGCATTGGAAAAAAATTGCTAGACACTTTCTAGGGAACAAGACACCACAACAAGTTCAAAGCTATGTTGCTGGCTTCTTCTGGAACCTTCCAGCCACACACTTTTTCAACTTTAGGAGAAGGAAACCCACCAACCATTCTGCTGGTAAACTTATGGCCAGAAACGGGAACCTCATGAGTGCACCTACCTCACGTTCCATGCAAATGGTTCTTAAAAAACCACAACAAACCCTCACTCTCTTCCCAGAGGAAGCTCATTTTTCTCAGGTTTCACCTTTCGGAGAAGGTAGCAGTAGCAGCAACCATATCGACGGGTTCCAGATGCTGACAGGTGGTGCAAGCACTTCCTTGACAACTAGTTCTAATGGAGAAGTTGATTTGGAACTGCGCTTGGGTTGA 726 0.4477 MILNFGLVSAENVQFKNALMPPWAYLNPILHHTNQHQTTLSLALGLTHEPSQNITTWIQSNMNGYQVATIPQPVPESSTFLLPHGVRPEEPWTETEHQLFLAGLIMYGKGHWKKIARHFLGNKTPQQVQSYVAGFFWNLPATHFFNFRRRKPTNHSAGKLMARNGNLMSAPTSRSMQMVLKKPQQTLTLFPEEAHFSQVSPFGEGSSSSNHIDGFQMLTGGASTSLTTSSNGEVDLELRLG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi176g00045 241 Pfam Myb-like DNA-binding domain 90 131 IPR001005 -
Sebi176g00045 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 128 IPR017930 -
Sebi176g00045 241 CDD SANT 91 131 IPR001005 -
Sebi176g00045 241 SMART sant 88 138 IPR001005 -
Sebi176g00045 241 NCBIfam myb-like DNA-binding domain, SHAQKYF class 88 132 IPR006447 GO:0003677
Sebi176g00045 241 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 84 149 IPR043363 -
Sebi176g00045 241 SUPERFAMILY Homeodomain-like 91 138 IPR009057 -
Sebi176g00045 241 ProSiteProfiles Myb-like domain profile. 91 136 IPR001005 -
Sebi176g00045 241 Gene3D - 90 140 - -
Sebi176g00045 241 ProSiteProfiles SANT domain profile. 87 131 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi176g00045 Sebi-Chr176 1460781 1461722 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi176g00045 Myb_DNA-binding 1.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi176g00045 - - gmx:102663307 221.861