Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi176g00044 ATGGCTATTGAAATGATTAATCTCATAGACTCACCCCCATCACCACCCAAGTCACCATCTGAGGCACAAATAATCCTTAATTTTGGACTCACCCATGAGCCCTCTCAGAATATCACTACCTGGATCCAATCCAACATGAATGGTTATCAGGTTGCTACAATTCCTCAACCAGTACCTGAATCAAACACATTCTTGCTTCCTCATGGTGTTAGACCTGAGGAGCCTTGGACTGAAATAGAGCATCAGTTATTTTTGGCGGGGCTAATCAAGTATGGAAAAGGACATTGGACAAAAATTGCTAGACACTTTCTAGGGAACAAGACACCACAACAATTTCAAAGCTATGTTGCTGGCTTCTTCAGGAACCTACCAGCCACACACTTTTTCAACTTTAGGAGAAGGAAACCCGCCAACCATTTCACTGGAAAACTTATGGCCAGAAACGGGAACCTCATGAATGCACCTGCCTCACGTAGCAGTAGCAGCAACCATATCAACGGGTTCCAGATGCTGACAGGTGGTGCAAGCACTTCCATGACAACTAGTGCTAATGGAGAAGTTGATTTGGAACTATGCTTGGGTTTATGTTAG 591 0.4399 MAIEMINLIDSPPSPPKSPSEAQIILNFGLTHEPSQNITTWIQSNMNGYQVATIPQPVPESNTFLLPHGVRPEEPWTEIEHQLFLAGLIKYGKGHWTKIARHFLGNKTPQQFQSYVAGFFRNLPATHFFNFRRRKPANHFTGKLMARNGNLMNAPASRSSSSNHINGFQMLTGGASTSMTTSANGEVDLELCLGLC 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi176g00044 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 111 IPR017930 -
Sebi176g00044 196 SMART sant 72 122 IPR001005 -
Sebi176g00044 196 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 68 121 IPR043363 -
Sebi176g00044 196 CDD SANT 75 111 IPR001005 -
Sebi176g00044 196 ProSiteProfiles SANT domain profile. 71 124 IPR017884 -
Sebi176g00044 196 SUPERFAMILY Homeodomain-like 75 123 IPR009057 -
Sebi176g00044 196 Gene3D - 74 124 - -
Sebi176g00044 196 Pfam Myb-like DNA-binding domain 74 113 IPR001005 -
Sebi176g00044 196 ProSiteProfiles Myb-like domain profile. 75 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi176g00044 Sebi-Chr176 1405377 1406403 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi176g00044 Myb_DNA-binding 1.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi176g00044 - - gsj:114414101 179.874