Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi176g00017 ATGGCCAAGAAAGTTCATGCTCATAAGAGACAAAATGCCGGCCTGAAAAGTCCTCGAAATAACATGGAGCTGCAAGTTGAAACATCTCAGATCCACTATCCAGAAAGAGAATTACCATACTCTTGCCAAGAAGAAGATAGCTGGTCAAAGAATAATAGTTACTCAAATGCGGCTTCAGTGAAAAAATTGAACAATGAGGAGCAATCCAAACAATCAGGCACCAGAAATAATGCACCAAGCCTTGTGGCAAGATTGATGGGGGTAGACATGATGCCATTAGACACTAAATCTGTTGTTCCACTTCCATCAGATGAAAGCATAAGTGAAAATATGGAAAGGAAGTTTTCAAAGAAAGGAATGAACAAAAGGGTTCCAGTTAGTAAGGGTTCCTCCAACTTTCATTCTTATAGCCAGATGGAACTTGATTCATTTTATCAAGACTTTGATGATGATGGATGGGGACAGAATTTTGGAAAACCAAGGCCAAGGGAACATCCTCAGGAAGAGGAACTCCAGAAATTCAAGAAAGAATTTGAGGCATATCAAGCAGCAAGAATTAAGGAGTGTTCAAAGGTTGTTCAAATTGGAAGTGTTTCTATGCGAATTCTTGCTCAAGAGAACCTGAACAAGGAAAAGGTACCACATATTCCAAATTCTCAGAGAGAAGCAACAGAGAAATCTGCAGAACTTGATAGCCACTCATTTACAACTAAGCTACCAAATGATGATATTGTGGAGTCAATCTCAACTAAGAAAAAAGAATCCTTTCCTTCAAGGAATAAAACACTAAGTAGAGGCTGTGAGGAGTCTCTAATGATGAAATCTAGAAGCATAATAGATATATGTTCTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTCCTGATAGGATTTGCAATGGCAATCATGAAGATAATTGGATCAGTTCATCAAGCACTTTACATGGGAGAGATAGTATAGAAAATTTTCTTGAGGAGGTGAGAGAGCGGTTGAACTGTGAACTTCAAGGGAAAACTGTCATAAAGGGTTCTGTGTGTAGAGGAAATGGAATTGATACAGCTTACAATGAAAAACCATTTGATCCTAAAGAAATAGCTCATCATATAGCAAAAGAGAGAGATAGATTAAAGCAAGTAGAGGATGATAAAAAGTGTACAAGTGACATAAGCCAGTGGAGAATTTTGAAAGAGAAAGAAAATATACAAACAGGTTCCTTCAGGCATGGACTAGATGACAATTTATTGCTCCACAAGGATTTGTCCCCTAGTAACCTTGTAAGATCCTTGTCTGCTCCTGTATCAGGAACATCATTTGAGAAGCTTCTTCTAGAGGACCGCCACATCTTAACGGGTGCCCTTATTAGGAGGAAGCTTGAAGCAGTTGAAACAATCCATGTTGATGTTAAAAAACAGAAGAAAGATAGATTTAATATTAAAGAAAAAGTTTCCCATTTTAAATATACTTTTGGTCTAAGAAGAAAGTTATTTGGTAAGACAGTTCAGTCAATGATAGAAGCACGTGGCAATGAAGTAAGAGATATCAGAAGTGGACCAACTGTTCTCATGAAATATGGTGAGAGGCATGAGAACTACACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCTGTACTCAGGAAGAGCTTTGGAGACTGATTGAATATTTAAATCCAATATCAAATCCAGATGTATCTTCAGTAGACAATATTGGTATGTCTGAGGATTTTAGAGATATTGGTTCTGGTTTGAATGAGAAAAGGATGCAACTCAGTCGACTTGAGTCTGATGGCCCTGAGGACTATACAACAAAGCAGGATCCTTTTGAGTCTGAATTAGTTCAATTGGAGGATCCAGCAGAATCTTACATAAGAGATCTGCTTGTTGCTTCTGGTCTGTACTTTGGTTCATGGGATAAATGTTTAACAAGATGGGACTCATTTGCAAAGCCTATTGGTAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAAGAAATTGGTCAAGGAGAATGAAAGATCTAAAAAGGATCAAAATGAGAGTAAGTTAGAGCACAAGGTTTTACTTGATTTATTAAATGAAGCACTTTCCATTGTTCTTGGACCACCTTTGACATTGCCTAGATTCAGAAGGAAACTAAGCAATTCCTCCATTCAGCCTCCACCATGTGGAAGGGAACTACTAAAGTTAGTATGGGACATTATTTGTGTTTCTCTATATCCTTCATCTAACACATCTCCTTATTCACTTGATCGTTGGGTGGCACATGATTTGAGATCCATCTCCTGGCCTGGACTAATGAATGATCAAATCAATATAATGGAAAGGGAGATCGCATGTCTAATCACTGATGATTTGGTTGAAGAATTCATAAAGAATATGCTCTTAGGTGTAGTGTAA 2397 0.3805 MAKKVHAHKRQNAGLKSPRNNMELQVETSQIHYPERELPYSCQEEDSWSKNNSYSNAASVKKLNNEEQSKQSGTRNNAPSLVARLMGVDMMPLDTKSVVPLPSDESISENMERKFSKKGMNKRVPVSKGSSNFHSYSQMELDSFYQDFDDDGWGQNFGKPRPREHPQEEELQKFKKEFEAYQAARIKECSKVVQIGSVSMRILAQENLNKEKVPHIPNSQREATEKSAELDSHSFTTKLPNDDIVESISTKKKESFPSRNKTLSRGCEESLMMKSRSIIDICSSPTQIVILKPGPDRICNGNHEDNWISSSSTLHGRDSIENFLEEVRERLNCELQGKTVIKGSVCRGNGIDTAYNEKPFDPKEIAHHIAKERDRLKQVEDDKKCTSDISQWRILKEKENIQTGSFRHGLDDNLLLHKDLSPSNLVRSLSAPVSGTSFEKLLLEDRHILTGALIRRKLEAVETIHVDVKKQKKDRFNIKEKVSHFKYTFGLRRKLFGKTVQSMIEARGNEVRDIRSGPTVLMKYGERHENYTEVPPSPASVCSCTQEELWRLIEYLNPISNPDVSSVDNIGMSEDFRDIGSGLNEKRMQLSRLESDGPEDYTTKQDPFESELVQLEDPAESYIRDLLVASGLYFGSWDKCLTRWDSFAKPIGNSVFEEVEESHKKLVKENERSKKDQNESKLEHKVLLDLLNEALSIVLGPPLTLPRFRRKLSNSSIQPPPCGRELLKLVWDIICVSLYPSSNTSPYSLDRWVAHDLRSISWPGLMNDQINIMEREIACLITDDLVEEFIKNMLLGVV 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi176g00017 798 MobiDBLite consensus disorder prediction 215 238 - -
Sebi176g00017 798 Coils Coil 656 676 - -
Sebi176g00017 798 Pfam DUF761-associated sequence motif 77 92 IPR032795 -
Sebi176g00017 798 MobiDBLite consensus disorder prediction 1 79 - -
Sebi176g00017 798 Pfam Domain of unknown function (DUF4378) 621 788 IPR025486 -
Sebi176g00017 798 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 371 794 - -
Sebi176g00017 798 MobiDBLite consensus disorder prediction 215 232 - -
Sebi176g00017 798 MobiDBLite consensus disorder prediction 14 28 - -
Sebi176g00017 798 MobiDBLite consensus disorder prediction 44 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi176g00017 Sebi-Chr176 454635 459209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi176g00017 60 793 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 35.678 1.52e-117 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi176g00017 - - gmx:100810825 1005.36