Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi175g00057 ATGGAGAGCTTAAAAGCACCTTTCAAGGGTATTGTAAACGATTTTCAAGCAAGAGCAGTGCACTATAAAGAAGATTGGACTTGTGGTCTCAGGTCAGGAATTGGGATATTGGCCCCAACTACCTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCCTTTGGCGAGCAGCTCAGTAGAGACACAGATGGAAGCTTGAGCACGGTAGAAACACTGGCTTCTACAGCCATTTGTGGAATCATACACTCAATTTTGGGTGGCCAACCTCTCCTGATACTAGGAGTAGCAGAACCCACTATCCTTATGTACACCTATTTGTACAACTTTGCTAAAGATAAGGAAGGCTTGGGACAAGAACTCTTTTTGGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTGTTTCTTCTAGCAATCTTCAATGCTGGCTATATCATCAATAGGTTTACAAGGATTGCGGGTGAGCTTTTTGGCATGCTGATCACAGTCTTGTTCATTCAAGAGGCTATCAAGGGAATGGTAGATGAGTTTAGAATTCCTAAAAAGGGAGACCCAACATCGGACAAGTACCAATTTCATTGGCTGTATGCAAATGGATTGCTGGGTATTATATTCACCTTTGGTCTTCTCTATACTTCTTTAAAAAGCAGAAGAGCGAGGTCATGGTTATATGGGACAGGATGGTTCAGAAGTTTCATTGCAGACTATGGGGTGCCTTTAATGGTGGTGGTGTGGACAGCTCTATCATTCACAGTACCAAGTAAACTGCCTTCTGGAGTTCCCAGAAGGCTCATTGCTCCTCTGGCTTGGGAATCTACATCTTTGCATCATTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCAGCATACATTTTTGCTGCTTTTATTCCCGCCTTAATGATAGCCGGGCTTTACTTCTTTGACCATAGTGTTGCTTCTCAAATGGCACAACAAAAAGAATTCAATCTCAGGAAACCTTCTGCATATCACTATGACATATTGTTGTTAGGATTCATGACTTTGCTTTGTGGATTAATTGGCTTACCCCCTTCAAATGGAGTTCTGCCTCAATCTCCTATGCACACCAAGAGCCTGGCTGTTCTCAAGAGACAGTTGATCCGAAGAAAGATGGTAAAAAGTGCCAAGGAAAGCATAAGACAGAAAGCTAGCAACTATGAAATCTATGGGAAGATGCAAGCAGTTTTTATAGAAATGGATAACAGTCCAGATAATCATTCAGTGGTCAAAGAACTAGAGGATTTGAAAGAGGTTGTCCTAAGTGGTGAAGATAAAGGAGACAACAATAATACATTTGATCCTGAGAAACACATTGATGCATATTTGCCTGTCAGAGTAAAGGAGCAGAGAGTGAGCAATCTCTTACAATCACTCCTTGTAGGAGCAGCAGTCTTTGCTATGCCTGCCATAAAAAAGATACCAACTTCAGTTCTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCTGGAAATCAATTCTGGGAGAGGATACTACTTCTTTTTGTAGGACCTAGTAGGCGGTACAAATTATTAGAAGGGGATCATGCATCCTTTGTTGAGTCAGTACCTTTCAGATACGTAGTCTTCTTCACACTCTTCCAATGTGTGTACTTCTTGGTTTGTTTTGGAGTGACATGGATTCCCATAGCTGGAATGCTGTTCCCCTTGCCTTTCTTTTTGCTGATCACATTGAGGCAGCATATACTCCCCAAGCTGTTCAGTCCACACCATCTTAGGGAACTAGACGCAGCTGAATATGAAGAAATAGCTGGTGCTCCAAGACTAAGTTTCAATATGTCTTTCAGGGAGGTGGAATCATCTCGAGTTGGATCCAAGGAAATAGGTAATGCTGAAATATTGGATGAATTAACTACTAATAGAGGGGAGTTGAAGGTCAGAGCTTTTAGCTTTAGTGAGGAAAGAAATAGCCAGGTTTATCCTGATGAGGAAATGGATCCACACTAA 1998 0.4179 MESLKAPFKGIVNDFQARAVHYKEDWTCGLRSGIGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLILGVAEPTILMYTYLYNFAKDKEGLGQELFLAWAGWVCVWTALLLFLLAIFNAGYIINRFTRIAGELFGMLITVLFIQEAIKGMVDEFRIPKKGDPTSDKYQFHWLYANGLLGIIFTFGLLYTSLKSRRARSWLYGTGWFRSFIADYGVPLMVVVWTALSFTVPSKLPSGVPRRLIAPLAWESTSLHHWTVIKDMGKVSPAYIFAAFIPALMIAGLYFFDHSVASQMAQQKEFNLRKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSAKESIRQKASNYEIYGKMQAVFIEMDNSPDNHSVVKELEDLKEVVLSGEDKGDNNNTFDPEKHIDAYLPVRVKEQRVSNLLQSLLVGAAVFAMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVGPSRRYKLLEGDHASFVESVPFRYVVFFTLFQCVYFLVCFGVTWIPIAGMLFPLPFFLLITLRQHILPKLFSPHHLRELDAAEYEEIAGAPRLSFNMSFREVESSRVGSKEIGNAEILDELTTNRGELKVRAFSFSEERNSQVYPDEEMDPH 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi175g00057 665 Gene3D Helical hairpin bin 18 60 - -
Sebi175g00057 665 PANTHER ANION EXCHANGE PROTEIN 5 601 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sebi175g00057 665 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016020
Sebi175g00057 665 Pfam HCO3- transporter family 453 543 IPR011531 GO:0006820|GO:0016020
Sebi175g00057 665 Pfam HCO3- transporter family 199 374 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi175g00057 Sebi-Chr175 1450753 1454034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi175g00057 1 660 Antiporters AT1G74810 72.222 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi175g00057 K24194 - gmx:100811184 1161.75