Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi174g00074 ATGGGTATGGCTGCAGAGACCCAGTTCCATGTTTTGGCTGTTGATGACAGTCTTATTGACAGAATGTTGATTGAGAGGCTCCTAAAAACCTCTTCCTTTCATGTTACTGCAGTGGACTCTGCCAGTAAGGCCTTAAAATTTCTTGGTTTGGTTGAAGATGAGTTGAGGACTTTTGACACTCATGTTGTTGCTTCAGAAATTCATCAGGATGTAGATGTAAACCTGATCATAACAGATTACTGTATGCCAGAAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAGACATACCAGTTGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATCAACAGATGCTTGGAAGAGGGAGCTGAAGAATTCTTCCTGAAACCAGTTCAACAGTCAGATGTAAACAAGCTCAAGCCCCATTTGTTGAAATCAAGGGTCAAGGAAGAGCAAGACCAACCCATCAACAACAAAAGGAAGGGCATGGAAGAAAGCCACTCCCCAGATAAAACCAGATTAAAATGCAGTATTTAA 543 0.407 MGMAAETQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSASKALKFLGLVEDELRTFDTHVVASEIHQDVDVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKSRVKEEQDQPINNKRKGMEESHSPDKTRLKCSI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi174g00074 180 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Sebi174g00074 180 Gene3D - 10 176 - -
Sebi174g00074 180 CDD REC_typeA_ARR 11 141 - -
Sebi174g00074 180 MobiDBLite consensus disorder prediction 148 180 - -
Sebi174g00074 180 SUPERFAMILY CheY-like 8 149 IPR011006 -
Sebi174g00074 180 SMART REC_2 9 145 IPR001789 GO:0000160
Sebi174g00074 180 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 163 IPR045279 GO:0009736
Sebi174g00074 180 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi174g00074 Sebi-Chr174 1292441 1293717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi174g00074 1 175 Response Regulator Gene Family AT3G57040 52.863 2.04e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi174g00074 Response_reg 1.3e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi174g00074 K14492 - gmx:100787436 312.383