Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi174g00066 ATGGATCCTATGAGTGAAGATTTTATTTTTAATATGATGGAACCTACTGAAACTGACAAAACTTTTGAGGGTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTGATAAGGATCCTGAAGTTTGGAAAAGGATAAGTGAACTAACAGATGAGGATATCAGAGGGCTTGAGTTTGATACTGAAGAGGATGCATATGATTTCTACCGTGAGTATGCTAAATTCATAGGATTTTCTGTAAGGAAAGGTGATGTGTATAGAAATTGTAATGGTACAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGAATTAGGGAGGCAAAGGCCCTCACCCGAACTGAGTGTAAAGCAAGGCTCCGTGTTTCCTTAGATTATAGAAGTAGAAAGTGGAGGGTTGGAATCTTTGAGCCAGCTCATAACCATGAATTGACTCCTGCAAGTATGATGCATTTGCTACCTGCTTATCGTGGGTTGAGTGTAGCGGATAAGGCACAAGTTGACGGTCTACATCATTACGGTGTCAGGACTTGTCATATAATGGGTCTTATAATGGGTCAAAAGGGAGGTTATTCTGATCTTGGTTTTTGTAAGAAGGATTTGTACAATCATATTGATAAGGAGAATCGGGCAAAAATAGAGGATGGGGATGCATTTGCTGCGTTATGCTACCTTCAATCTAAGTTTGACAACAATCCGATGACATTTGTAAAGACAACTTCTATATGTGAAGGGATTAACTCATTCATTAAGAGGTATGTTCAGAGCAAAAATAGCCTTGTTGATTTTCTTCACAATTTTGAGAGAGCTGTGAATGAATATAGACACAACGAGTTAACTTCAGATTTCAAGTCGAAATACACTCAACCTGTGATGACTACTGCTTTGGAAAGATATGAAGTTCAAGCTTCAAATGTCTACACGAGGAATAAGTTTTTTGATGTTCGAAAGCAAATTGAGAAAGTTGCTGCCATAAATGTCATTGAGAGGACAGATGTTGGTAATGTCATTACAATGCAGATGAATAAATTTGGCACTCCTGATTCTTCTTACATTGTTACGTTGGATAAGTCTGATGGTAATTTCGTTTGTGATTGTCGCATGTTTGAATCATGTGGTCTCCCTTGTTCACACATTTTCAGTGCTATGAAGCATGAGCAAGTGGAATCCATTCCTTCATCTTTGATTTTGAAAAGATGGACTAAGTTGGCTAAAGTTCAGCACATTTCTTCTGTTTATGCTGAAGAAGGTGACACATCAAAGAAAGATTTATTGAGGTCAGGTGCTGTTGGTGCTGCATGTAACAGGCTTAACAAGGCTGCACGTAGAAATCCTCACAATTTTGTAAAGAACATTGAATCTATTCATAAGTTGGCAGAACAGATGGAAAGGCAGGAAGGGCACACAGTTAGGACATGCACTAAATATGCTACTCGTGATCAGTTGGATACAGTTATTGAAGAGGAATCATCTGTTGAGACTGATGAAGATTCAAGAGATAAAAGTAGGTCACGGGATGTTCACATTTCTAACCATTTGAATGATGTAACAGTCTCTGCTGGTCAGAATTGTGCTTCAGACAAGGGTCAGTCTAAGAAGAGAAGGAGAAATAGTGAAGGTTTGAAAATGACCCAAGAATCTGTTAATGAAAGGAGGTCCAGTGATGTGAACAAATGTCAACAGAATGATACTGGTGTTGCATTCAGCAGAATAAATACCCCCTCCTTATTTGGTAATCATGTGTACTATTCAAACATGAATGGTCCGAGTATTTCAAGACCTGTGCATATTAGACCTTCCATGATTCATGGATTTGGGCAAGGATTTGTTGGTAATATAGTTGAGGACATGCTACAGTATCCCCAAATGTATATGCAGCAATCTATGTATACACCTCCAGTAGTTCATAACTTTGACCAATATGGTAATAGCTTTCAGTTTCCTAATTCTATGAACAACGTTGAAAGGAATAATGGTGCAAGAAGCAAGGGTTTTGGAAAAAAAATGAAATATAATTGA 2064 0.3784 MDPMSEDFIFNMMEPTETDKTFEGDPKNSKSPNKDNLDSDKDPEVWKRISELTDEDIRGLEFDTEEDAYDFYREYAKFIGFSVRKGDVYRNCNGTITMRQLVCNREGERSEKHLNRTDRIREAKALTRTECKARLRVSLDYRSRKWRVGIFEPAHNHELTPASMMHLLPAYRGLSVADKAQVDGLHHYGVRTCHIMGLIMGQKGGYSDLGFCKKDLYNHIDKENRAKIEDGDAFAALCYLQSKFDNNPMTFVKTTSICEGINSFIKRYVQSKNSLVDFLHNFERAVNEYRHNELTSDFKSKYTQPVMTTALERYEVQASNVYTRNKFFDVRKQIEKVAAINVIERTDVGNVITMQMNKFGTPDSSYIVTLDKSDGNFVCDCRMFESCGLPCSHIFSAMKHEQVESIPSSLILKRWTKLAKVQHISSVYAEEGDTSKKDLLRSGAVGAACNRLNKAARRNPHNFVKNIESIHKLAEQMERQEGHTVRTCTKYATRDQLDTVIEEESSVETDEDSRDKSRSRDVHISNHLNDVTVSAGQNCASDKGQSKKRRRNSEGLKMTQESVNERRSSDVNKCQQNDTGVAFSRINTPSLFGNHVYYSNMNGPSISRPVHIRPSMIHGFGQGFVGNIVEDMLQYPQMYMQQSMYTPPVVHNFDQYGNSFQFPNSMNNVERNNGARSKGFGKKMKYN 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi174g00066 687 MobiDBLite consensus disorder prediction 1 42 - -
Sebi174g00066 687 Pfam FAR1 DNA-binding domain 70 160 IPR004330 -
Sebi174g00066 687 MobiDBLite consensus disorder prediction 18 42 - -
Sebi174g00066 687 MobiDBLite consensus disorder prediction 543 572 - -
Sebi174g00066 687 MobiDBLite consensus disorder prediction 664 687 - -
Sebi174g00066 687 SMART 26again6 377 404 IPR006564 GO:0008270
Sebi174g00066 687 MobiDBLite consensus disorder prediction 510 525 - -
Sebi174g00066 687 MobiDBLite consensus disorder prediction 526 542 - -
Sebi174g00066 687 MobiDBLite consensus disorder prediction 502 572 - -
Sebi174g00066 687 PANTHER OS01G0519700 PROTEIN 250 494 - -
Sebi174g00066 687 ProSiteProfiles Zinc finger SWIM-type profile. 366 402 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi174g00066 Sebi-Chr174 1114986 1118160 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi174g00066 FAR1 1.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi174g00066 - - aip:107640898 278.485