Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi174g00046 ATGCTTAGTGCTGAAACCCCATTGTTGATGGGAAAAGCATGTGAGATTTTCATTCAGGAGCTCGCCTATCGTGCTTGGATGCGTGCTGAGGAGGCTAATAAACGCACATTACAACCTCATGATGTTGCCAAGACCATTATGCAAACTGATGTCTTTGAGTTCTTGACTGATGAAGAGGATGTTGGAAACATTGTAGAAGGAGAACATGCCATGCCTCATGTTGATGCTAGTTTTATGGAAGATCTTATGATGAATATAGGTCTTGTAAGTTCTGGAAATTGTGTAGAAGAAAATCAAAATCCCCTGCCTCATGCTACTGGTTTTATGGGAAATCCTACGATGAATATGGACAATGTAAGTACTAAAAACTTTGCAGAAGACGTTATACCTCATGCTATTGGTCTGATGGGTATTCCTATGAATATGGGCAATGACCTGGTGGCGGGAAATCAACAATCTTCCCATCCCTCCATGATGCAGTCGCAGTTAATGCCTCCAGATCAATTACCTTATAATTGTTATCCCAATGACATGATGGAAAGAAGCTCACATTTCCCCTCACCCTCCATGATACAACCATCATTTGTGCCTTTAGATCAACCGCCTTACGAAAGTGACATTGACATGGCGGTAAGTAACCAACAATCTGTTCAGCCGTCCATGATGCAACCACCCCCATTTATGCCATTAGATCAATTACCTTTAAATTGTCATCCCAAGTAA 723 0.4149 MLSAETPLLMGKACEIFIQELAYRAWMRAEEANKRTLQPHDVAKTIMQTDVFEFLTDEEDVGNIVEGEHAMPHVDASFMEDLMMNIGLVSSGNCVEENQNPLPHATGFMGNPTMNMDNVSTKNFAEDVIPHAIGLMGIPMNMGNDLVAGNQQSSHPSMMQSQLMPPDQLPYNCYPNDMMERSSHFPSPSMIQPSFVPLDQPPYESDIDMAVSNQQSVQPSMMQPPPFMPLDQLPLNCHPK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi174g00046 240 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 57 - -
Sebi174g00046 240 SUPERFAMILY Histone-fold 1 57 IPR009072 GO:0046982
Sebi174g00046 240 Gene3D Histone, subunit A 1 58 IPR009072 GO:0046982
Sebi174g00046 240 Pfam Core histone H2A/H2B/H3/H4 1 44 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi174g00046 Sebi-Chr174 881035 882734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi174g00046 1 67 CCAAT-HAP5 Transcription Factor Family AT5G63470 47.368 4.55e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sebi174g00046 Histone 9.1e-07 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi174g00046 - K08066 gsj:114370134 82.0333