Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi174g00027 ATGAGAGGGGGGAGCACAGTTGATTCTTTTCACGTATCTGACTTTGGAGCATTTGATCAATCATATCGCATAGAGGATGCTGTTGACCTTAGTGGAAATTCTGTTTTTAACTCACTAAAAGTAAGTGGCCAAACAATTTCTCCGGGTCTTGTTCAGATTAATACTCTTCATAAGTTGCCAACTTCACTTGATAAAAGCCTGTTGACGAACCAAACAGAGCCACATAGGTTGCAATTACAAGAGGTTCAATCATCAAATCCTGGCACAATATTAGGTGGTGATACTGAACACCAAGAAGAATCTGCCATGGCTGATGCCAGTCCTAGGACTGATATTTCTACAGATGTTGACACTGATGACAAGAACCAGCGGTTTGATAGAACTCAATCCCTTGCTGCTGTGGGCTCTGACTCCAGTGACAGATCAAAGGATAAATCAGATCAGAAGAATCTCCGCAGGCTTGCTCAAAATCGCGAAGCAGCAAGAAAAAGCCGGTTGAGAAAGAAAGCCTATGTCCAACAGTTGGAAAGTAGTCGATTGAAGCTGACCCAGCTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAATCTTCATATCAAGCTCTGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCTATGCAATTTGATGCTGAATATGCAAGGTGGCTGGAGGAGCAGAATCGACAAATTAATGAGCTTAGAGCAGCTGTAAATTCTCATGCAAGTGATACTGAACTTCGCATGATTGTTGATGGTATATTGGCACATTATGATGAGATTTTTAAGCTGAAAGGTGTTGCTGCTAAAGCTGATGTTTTCCATTTGTTGTCTGGGATGTGGAAAACACCTGCTGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTCCTGGCAAATCAATTGGAACCTCTTACAGAGCAGCAGCTGATGGGTATTACCAACTTGCAACAATCCTCCCAACAAGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTGCAGAGACATTGTCCACTGCAACACCCAACTCATCTGGTTCCTCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTAGGGACACTCGAGGGGTTTATTCGACAGGCTGATAATCTACGCCAGCAGACTCTACAACAAATGCACCGTATACTGACAACTCGCCAATCAGCTCGTGCACTCCTTGCTATACATGACTATTTTTCGCGACTGCGTGCTCTCAGTTCGCTCTGGCTGGCCCGCCCAAGAGATTGA 1305 0.4506 MRGGSTVDSFHVSDFGAFDQSYRIEDAVDLSGNSVFNSLKVSGQTISPGLVQINTLHKLPTSLDKSLLTNQTEPHRLQLQEVQSSNPGTILGGDTEHQEESAMADASPRTDISTDVDTDDKNQRFDRTQSLAAVGSDSSDRSKDKSDQKNLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFKLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTATPNSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi174g00027 434 SMART brlzneu 145 208 IPR004827 GO:0003700|GO:0006355
Sebi174g00027 434 MobiDBLite consensus disorder prediction 138 152 - -
Sebi174g00027 434 FunFam BZIP family transcription factor 148 197 - -
Sebi174g00027 434 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 152 167 IPR004827 GO:0003700|GO:0006355
Sebi174g00027 434 MobiDBLite consensus disorder prediction 75 92 - -
Sebi174g00027 434 SUPERFAMILY Leucine zipper domain 149 192 IPR046347 GO:0003700|GO:0006355
Sebi174g00027 434 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 147 191 IPR004827 GO:0003700|GO:0006355
Sebi174g00027 434 Pfam Seed dormancy control 231 306 IPR025422 GO:0006351|GO:0043565
Sebi174g00027 434 CDD bZIP_HBP1b-like 149 201 - -
Sebi174g00027 434 Gene3D - 148 200 - -
Sebi174g00027 434 PANTHER TRANSCRIPTION FACTOR TGA9 94 433 - -
Sebi174g00027 434 MobiDBLite consensus disorder prediction 75 152 - -
Sebi174g00027 434 Coils Coil 168 195 - -
Sebi174g00027 434 Pfam bZIP transcription factor 148 189 IPR004827 GO:0003700|GO:0006355
Sebi174g00027 434 ProSiteProfiles DOG1 domain profile. 214 431 IPR025422 GO:0006351|GO:0043565
Sebi174g00027 434 Coils Coil 225 245 - -
Sebi174g00027 434 MobiDBLite consensus disorder prediction 112 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi174g00027 Sebi-Chr174 450940 457114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi174g00027 103 434 bZIP Transcription Factor Family AT3G12250 79.518 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi174g00027 DOG1 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi174g00027 K14431 - gmx:100101881 732.25