Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi174g00024 ATGCATTTGGAGCGGGTTGTGAAGCACCTGCTTGAGATTGAGTACATTCTCTTTAGTAATGTCTTTGAGAAAATTGGTCCAGAAGCATGGACTGCAATTGAATCAGGAATTCTTTCTTTTCTTGAATTTGAAAAGAATGTCACTAGAAGTAAAAATGGTCCCTTCAAGTTGTTGAAGCTGCTGGACATATTCCGTGTCTTAAATGGCCTAAGACTAAATTTCAACCAGCTTTTCAATGGTAAAGCTTGTGAAGAAATTAGAACTTTGACAAAGGATCTTATCAACAAAGTTTTCAATGGTGCCAGTGATATATTCTGGCAACTTCCATTACACAAGGGAAGTCATTAG 348 0.3707 MHLERVVKHLLEIEYILFSNVFEKIGPEAWTAIESGILSFLEFEKNVTRSKNGPFKLLKLLDIFRVLNGLRLNFNQLFNGKACEEIRTLTKDLINKVFNGASDIFWQLPLHKGSH 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi174g00024 115 Pfam Exo70 exocyst complex subunit 3 108 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi174g00024 115 SUPERFAMILY Cullin repeat-like 6 108 IPR016159 -
Sebi174g00024 115 Gene3D Exocyst complex component Exo70 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi174g00024 Sebi-Chr174 427216 427563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi174g00024 2 108 EXO70 exocyst subunit family AT4G31540 52.212 8.27e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi174g00024 K07195 - aprc:113857240 162.925