Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi174g00023 ATGGCGGTTGAATTAGTAGGCAGTGCTCTTGTTTCTGCTTTCCTTCAGGTGACATTTGACAGGTTGGCTTCTGCGGAAATTTTGGACTACTTTCAAGGAAGAAAGCTCAATGAGAAGCTGCTTAACAAGTTGAAGATCATGTTGGGGTCCATCAATGTTGTGGTTGATGATGCAGAACGAAAGCAGATCAGAAATCAAGATGTGAAAGCATGGCTTGATGCTGAGGATCTCTTGGATGAAATAGACACTCAAATCTCCAAATGCAAGCTGGAAGCTGAATCTCAGTCCATTACTAGCAAGGTAAGGAATTTCTTTAGTGCTGCTGTCAGTTCATTTGACAAGGGAATTGAATCAAGGATGCAAGAAGTCCTCAACAACCTAGAATATCTTGCAAGCAAAAAGGATATACTAGGTTTGAAAGAGGCTAGTACTTTTGGTGTTGGATTAGGTAGTCAAATGTCACAAAAATTGGCATCAACATCCCTGCTGGGTGAAACTGTTATCTATGGTAGAGATGTTGACAAAGAAAGAGTCTTTAATTGGCTGATGTCTAACAATGAGAATGACAAATATCAACTGACAATTATTTCTATGGTGGGTATGGGTGGGATGGGTAAGACCACACTTGCCCAACATCTATACAATGACCCAAGGATGGAGGGAAATTTTGATATCAAAGCTTGGGTATGTGTTTCACATGAATTTGATGTTTTTAAGATAACAAGAGCAGTTCTTGAGGCAATCACTGGATCAACTGATGATAGTAGAGACCTAAATATGGTTCATGGAAGATTAAAGGAAAAGTTGAATGGAAAGAAATTTTTCCTTGTTCTGGATGATGTTTGGAACAAAAACCATATGCAATGGGAGGCTTTGCAAACTCCTTTTAGTTATGGGGCTCAAGGAAGCAAAATTCTTGTCACTACACGCAGCATGGAAGTTGCTTCAATCATGCGATCTATTAAAATACATCAGCTAAAGCAATTGCAAGGAGATCATTGGATTCGTAGTGGCACATGGATACATGAGTTGTTCGCCAAGTTTAAGTTCTTACGTGTCTTGTCTTTGCCTTTTCCCGATGTTAAAGAGGTGCCTAGCTTAATAGGCAATCTTAAACATCTCCGTTATCTAGACCTTGCTTATACTGCAATAAAAAAGTTACCTGAATCAACATGTTTGCTCTATAATTTACAAGTATTGAAGTTGAATCACTGCCTATCTTTGGAAGAGCTGCCCTTGAATTTGCATAAACTCACAAATTTGTGTCACCTTGATTTCAGTGGAACTAAGGTGAGAAAGATGCCAATGCATTTGGGAAAATTAGAGAATCTACAAGTATTGACTTCATTTTATATGAGCAAAAGTAGCAAGTTCAATATTCAGCAATTAGGAGAACTCAATCTTCGTGGAACACTATCAATTTGGGAGCTGCAGAATATCACCAATCCCTTGGATGCATTAGAAGCTAATATGAAAAATAAAAAACACATTGTGAAGCTACAATTAGGATGGAGTGCAAAGCATGATGATTCAGAGAAAGAAAGGGAAGTTCTTCAGAAGCTACAACCTTCCAAACACTTGGAAGAGCTGTCAATTAGGGAGTATGGCGGTACACGATTTCCAGATTGGTTTGGAGACAACTCATTATCCAATGTGGTTTCCTTAACATTGTGGAAGTGTGGAAACTGTGTTGTGTTGCCCCCACTTGGACTTTTGCCATCTCTCAAGAACTTATCAATTGAAGGACTATCAGAGATAATGGCGATTGGTAGTGAGTTTTATGGGAATGGGAGTAGCTCTTCTTCTATTCCATTTCCATCCTTGGAAACCTTATCCTTCAGTGGTATGGAGGGATGGGAAGAATGGGAATGTAAGATAGTGAGGGGTGCTTTCCCACGCCTTCAAAAGATTTCTATAGGGAATTGTCCCAAGCTGAAAGGTCACTTGCCAGAGCAACTTCCTTGTTTAATGACAGTAACTATTTATGATTGCAAACAGCTTGTGGCTTCTATTGCCAGGGCTCCGTCCATTCATCATTTATATCTAAAGAATTGTGGAAAGCTGCAACTTGATTATCATCCATCTTCTCTCAAAACCCTCAGGATCGGTGGACACTGCCTGGAAGGATCGTTGCTTGAAAGGATTGGGCACATCTTATCGGATAGCTCTCTTGAAGAATTGTCAATAGTTAATTGCCCAAATATGAATATTCCCATACGCCATTGCTACAATTTCCTTGTAACATTGCACATTAGCAATAGTTGTGACTCTCTAAGGACCTTTCCACTAGATATCTTCCCAAAACTTCAAATCCTCTGTTTAGAAGGGTGTAGTAATCTTGAAATGATTTCGCAGGAGCATGATGATATTCTCACATCTCTGACACATTTGAAAATTAGGAATTGCCCTGAATTTGTATCATTTCCTAGAAGAGGACTCTCTGAACCTAAGCTAGACACATTTGAAATTAAGGGATTGGAGAATTTAAAAACATTGCCTGAAAGTATGCATAACCTCCTTCCATTGCTTCGTAAGCTAGATCTAGAAGACTGTCCACAAGTGGAGTCATTCTCAAATGGAGGTTTGCCATCAAACCTAAAGTATTTGGTTCTTTGGAATTGTTCCAAAATTCTTATCGCCTCACTGAAATGTGCTTTGGCAACCAATACTTGTTTATGTCGCTTGTCTATTAAAGAAGTTGATGTGGAATCTTTTCCTGATGAAGGCTTGCTGCCACTCTCTCTTACTTCTCTATCTATCAGTTGGTGTCCAGATCTTAACAAACTGGACTACAAGGGTCTTTGCCACCTCTCCTCTCTTAAGTTGTTGTCTCTTGTTGACTGCCCCAAACTCCAATGCTTACCAGAGGAGGGTCTGCCCAAATCCATTTCAGCTCTATCAATTAGGGGAGATTGTTCGTTGCTCAAACAGCGTTGCCAGAAACCAAATGGGGAAGACTGGGGGAAGATTTCTCACATTCAAAAGATCAACTGCTGTAAGAAACTATGTTCCTTGTCGGAAGTTTTGCCTTCCTCCTTAAAAGTCCCCAATGATGACTCACAAGCTCTTGAATCAAGAAGGTGCAGATTGGCTCAAGGTCTCACTGAATATCATGAGAACCTGGGAAATTCGGTTAATCAGCGTCACCCTGAAGCTGTGGCAGTGAATTGA 3171 0.3999 MAVELVGSALVSAFLQVTFDRLASAEILDYFQGRKLNEKLLNKLKIMLGSINVVVDDAERKQIRNQDVKAWLDAEDLLDEIDTQISKCKLEAESQSITSKVRNFFSAAVSSFDKGIESRMQEVLNNLEYLASKKDILGLKEASTFGVGLGSQMSQKLASTSLLGETVIYGRDVDKERVFNWLMSNNENDKYQLTIISMVGMGGMGKTTLAQHLYNDPRMEGNFDIKAWVCVSHEFDVFKITRAVLEAITGSTDDSRDLNMVHGRLKEKLNGKKFFLVLDDVWNKNHMQWEALQTPFSYGAQGSKILVTTRSMEVASIMRSIKIHQLKQLQGDHWIRSGTWIHELFAKFKFLRVLSLPFPDVKEVPSLIGNLKHLRYLDLAYTAIKKLPESTCLLYNLQVLKLNHCLSLEELPLNLHKLTNLCHLDFSGTKVRKMPMHLGKLENLQVLTSFYMSKSSKFNIQQLGELNLRGTLSIWELQNITNPLDALEANMKNKKHIVKLQLGWSAKHDDSEKEREVLQKLQPSKHLEELSIREYGGTRFPDWFGDNSLSNVVSLTLWKCGNCVVLPPLGLLPSLKNLSIEGLSEIMAIGSEFYGNGSSSSSIPFPSLETLSFSGMEGWEEWECKIVRGAFPRLQKISIGNCPKLKGHLPEQLPCLMTVTIYDCKQLVASIARAPSIHHLYLKNCGKLQLDYHPSSLKTLRIGGHCLEGSLLERIGHILSDSSLEELSIVNCPNMNIPIRHCYNFLVTLHISNSCDSLRTFPLDIFPKLQILCLEGCSNLEMISQEHDDILTSLTHLKIRNCPEFVSFPRRGLSEPKLDTFEIKGLENLKTLPESMHNLLPLLRKLDLEDCPQVESFSNGGLPSNLKYLVLWNCSKILIASLKCALATNTCLCRLSIKEVDVESFPDEGLLPLSLTSLSISWCPDLNKLDYKGLCHLSSLKLLSLVDCPKLQCLPEEGLPKSISALSIRGDCSLLKQRCQKPNGEDWGKISHIQKINCCKKLCSLSEVLPSSLKVPNDDSQALESRRCRLAQGLTEYHENLGNSVNQRHPEAVAVN 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi174g00023 1056 Gene3D Ribonuclease Inhibitor 322 452 IPR032675 -
Sebi174g00023 1056 Gene3D - 20 121 - -
Sebi174g00023 1056 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 743 1006 - -
Sebi174g00023 1056 Gene3D - 151 321 IPR027417 -
Sebi174g00023 1056 Pfam Rx N-terminal domain 10 95 IPR041118 -
Sebi174g00023 1056 SUPERFAMILY L domain-like 337 734 - -
Sebi174g00023 1056 FunFam Probable disease resistance protein At1g61300 151 322 - -
Sebi174g00023 1056 ProSiteProfiles Leucine-rich repeat profile. 373 394 IPR001611 GO:0005515
Sebi174g00023 1056 PRINTS Disease resistance protein signature 268 282 - -
Sebi174g00023 1056 PRINTS Disease resistance protein signature 195 210 - -
Sebi174g00023 1056 PRINTS Disease resistance protein signature 935 951 - -
Sebi174g00023 1056 Gene3D Ribonuclease Inhibitor 815 986 IPR032675 -
Sebi174g00023 1056 Gene3D Ribonuclease Inhibitor 665 814 IPR032675 -
Sebi174g00023 1056 Gene3D Ribonuclease Inhibitor 453 664 IPR032675 -
Sebi174g00023 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 333 IPR027417 -
Sebi174g00023 1056 Pfam NB-ARC domain 174 333 IPR002182 GO:0043531
Sebi174g00023 1056 SUPERFAMILY L domain-like 695 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi174g00023 Sebi-Chr174 416320 421383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi174g00023 196 331 WRKY Transcription Factor Family AT5G45050 26.950 1.98e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi174g00023 - - tpra:123896001 777.319