Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi173g00118 ATGGATGAAGTTCTTTCAGTAATTCCAAATCAGTACCGCAAGCTACACACAACAAGATCATGGGACTTTATTGGGTTACCTTTGACTGCTAAGAGAAAACTGAATTCAGAGAGTGACACAATTGTGGCTCTTTTGGATACAGGGATCACTCCTGAGTTTCAAAGCTTCAAGGATGATGGATTTGGTCCTCCACCCGCTAAATGGAAAGGAACTTGTGACCAATATGCTAATTTCTCAGGCTGCAATAACAAGATCATAGGAGCCAAATACTTCAAGATTGATGGAAGGTCTGATCCATCTGACATATTATCTCCAATAGATTTGGATGGTCATGGCTCTCACACTGCATCAACAGCAGCAGGAAATCTTGTCCCAAATGCAAGTCTCTTTGGGTTAGCAAAAGGGACTGCTCGTGGTGCAGTGCCTTCAGCCAGATTGGCAATTTACAAAATCTGCTGGACAAAAGATGGATGTGCTGACATGGACATACTTGCTGCATTTGAAGCTGCTATACATGATGGTGTGGATGTCATATCCATTTCTGTAGGTGGAGGGAATGCAAATTATGTGCAGGACTGTATAGCCATTGGAGCATTTCATGCCATGAGGAAAGGCATAATCACTGTGGCCTCAGCTGGTAATGATGGTCCAACTATGGCAACTGTCACAAATAATGCACCTTGGATTGTAACAGTAGCTGCTAGTGGCATTGATAGGGATTTCCGGAGCACTATAGAGTTGGGGAATGGAAAAAATATTTCTGGGGTAGGAGTGAGCACCTTCAATCCAAAACAAAAACAGTACCCCCTTATTAATGGGATTGATGCAGCCAGAAACTCTGCAAGCAAAGAAAATGCTAAATTCTGCTTTGAAGACTCCTTAGAGCCAAAAAAGGTGAAAGGAAAGCTTGTTTACTGTATAGGAGGAACATGGGGCACTGACTCTGTCTTGAAGGCCATTGGAGGCATTGGTACTATAATTGAAAGGGACCAATTTCTCGATGTTGATCAAATATTCATGGCTCCTGCTACCATTGTGAATAGTAGCATAGGTGAAATTATTACCAATTATATGCACTCCACAAGATCACCATCAGCAGTGATATATAAGAGCCATGAAGTAAAAAGACCAGCTCCATTTGTTGCTTCATTTTCATCTAGGGGTCCAAATCCAGGATCTCAACATGTTCTCAAGCCTGATGTTACAGCACCTGGCATTAACATCTTGGCATCTTATACACTCAAGAAGTCACTTACAGGTTTGAAAGGGGATACCCAATTTTCAGAATTTACTCTAATGTCTGGGACTTCTATGTCATGCCCTCATGTTTCTGGAGTAGCAGCATATGTGAAGTCATTTCATCCAGCTTGGTCTCCTGCAGCAATCAGATCTGCCATTATTACCACAGCTAAACCTATGAGTCAGAGAGTTACCAAGGAGGGAGAATTTGGCTTTGGTGCTGGTCAAGTGAACCCAACAAGAGCTGTGAACCCTGGTTTAGTCTATGACATGGATGACTTTGGTTATATTCAGTTCTTATGCCATGAGGGCTATAATGGTTCCACTTTGTCAGTGTTAGTTGGTTCTCCTGTAAATTGCACTTCTTTGCTTCCTGGGCTTGGCCATGATGCTATCAACTATCCCAGCATGCAACTAAGTGTGAAAAGCAACACAGATACAACAGTAGGAGTTTTTAGGAGAAGAGTGACCAATGTAGGTCCTGCACCAACTATCTATAATGCCACCATCAAATCTCCCAAAGGAGTGGAAATGACAGTGAAGCCTACTAGCCTCATTTTCTCTCACACCATGCAGAAGCGGAGCTTCAAGGTAGTGGTGAAAGCAAAATCTATGGCAAGCATGAAAATTGTATCAGGTGCCCTTATTTGGAGAAGCTCCCGTTACACTGTTAGGAGCCCTATTGTTATCTATAGTCCATAA 1941 0.4245 MDEVLSVIPNQYRKLHTTRSWDFIGLPLTAKRKLNSESDTIVALLDTGITPEFQSFKDDGFGPPPAKWKGTCDQYANFSGCNNKIIGAKYFKIDGRSDPSDILSPIDLDGHGSHTASTAAGNLVPNASLFGLAKGTARGAVPSARLAIYKICWTKDGCADMDILAAFEAAIHDGVDVISISVGGGNANYVQDCIAIGAFHAMRKGIITVASAGNDGPTMATVTNNAPWIVTVAASGIDRDFRSTIELGNGKNISGVGVSTFNPKQKQYPLINGIDAARNSASKENAKFCFEDSLEPKKVKGKLVYCIGGTWGTDSVLKAIGGIGTIIERDQFLDVDQIFMAPATIVNSSIGEIITNYMHSTRSPSAVIYKSHEVKRPAPFVASFSSRGPNPGSQHVLKPDVTAPGINILASYTLKKSLTGLKGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPAWSPAAIRSAIITTAKPMSQRVTKEGEFGFGAGQVNPTRAVNPGLVYDMDDFGYIQFLCHEGYNGSTLSVLVGSPVNCTSLLPGLGHDAINYPSMQLSVKSNTDTTVGVFRRRVTNVGPAPTIYNATIKSPKGVEMTVKPTSLIFSHTMQKRSFKVVVKAKSMASMKIVSGALIWRSSRYTVRSPIVIYSP 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi173g00118 646 Gene3D - 238 374 - -
Sebi173g00118 646 FunFam Subtilisin-like protease SBT1.5 39 251 - -
Sebi173g00118 646 SUPERFAMILY Subtilisin-like 15 500 IPR036852 GO:0004252|GO:0006508
Sebi173g00118 646 Pfam Fibronectin type-III domain 545 643 IPR041469 -
Sebi173g00118 646 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 642 IPR045051 -
Sebi173g00118 646 ProSiteProfiles Serine proteases, subtilase domain profile. 20 496 - -
Sebi173g00118 646 CDD Peptidases_S8_3 14 470 IPR034197 -
Sebi173g00118 646 ProSitePatterns Serine proteases, subtilase family, serine active site. 435 445 IPR023828 -
Sebi173g00118 646 Gene3D - 513 645 - -
Sebi173g00118 646 Gene3D Peptidase S8/S53 domain 39 506 IPR036852 GO:0004252|GO:0006508
Sebi173g00118 646 CDD PA_subtilisin_like 244 368 - -
Sebi173g00118 646 PRINTS Subtilisin serine protease family (S8) signature 107 120 IPR015500 -
Sebi173g00118 646 PRINTS Subtilisin serine protease family (S8) signature 434 450 IPR015500 -
Sebi173g00118 646 PRINTS Subtilisin serine protease family (S8) signature 37 56 IPR015500 -
Sebi173g00118 646 Pfam Subtilase family 38 486 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi173g00118 Sebi-Chr173 1622317 1625858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi173g00118 1 482 Subtilisin-like Serine Gene Family AT4G00230 67.220 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi173g00118 - - ccaj:109800351 1155.2