Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi173g00113 ATGATGAAGAAGATTGACCTTCTTGAAGCTTCAAAACGGAAACTCTTGGGAGAAGGCTTGGAATCTTGTTCCATTGATGAACTACAACAGATAGAACAACAACTGGAGAAGAGTATAATCAATGTTCGAGCAAGAAAGACTCAGGTTTTCATGGAACAAATTGAGCAGCTAAAAGAAAAGGAAAAAGCCCTTGTTGCAGAAAATTCCAGGCTTTCTGAGAAGTGTGGTATATGTTCACAGCCAGCAGCAACAAAGGATCAGAGAGAAAATCAACCCCAACCCTATGCAGAAAGTAGTCCAAGTTCAGATGTTGAGACTGAATTGTTCATTGGGCTTCCAGAAGCAAGAACAAGGCGCATTTCTCCTCAGGCCTAA 375 0.4133 MMKKIDLLEASKRKLLGEGLESCSIDELQQIEQQLEKSIINVRARKTQVFMEQIEQLKEKEKALVAENSRLSEKCGICSQPAATKDQRENQPQPYAESSPSSDVETELFIGLPEARTRRISPQA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi173g00113 124 ProSiteProfiles K-box domain profile. 1 81 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi173g00113 124 MobiDBLite consensus disorder prediction 80 124 - -
Sebi173g00113 124 Coils Coil 25 45 - -
Sebi173g00113 124 Coils Coil 54 74 - -
Sebi173g00113 124 MobiDBLite consensus disorder prediction 83 105 - -
Sebi173g00113 124 Pfam K-box region 1 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi173g00113 Sebi-Chr173 1528576 1529932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi173g00113 1 62 MADS-box Gene Family AT2G45660 79.032 4.15e-26 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi173g00113 - - lja:Lj0g3v0285839.1 160.229