Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi173g00064 ATGCAATATTGCTTAAATAAGATTGTGGAATTCATGATCTTGTGTGCAGTGCCTGGAAGAGTTCGAGTGGCTGTAAGATTGAGACCACGAAATAATGAAGAAATGATGGCAGATGCTGATTTTGCTGACTGTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGGAGAAACAATTGGGATTCAGACACTTATGAGTTTGATGAAGTGCTTACTGAATTTGCCTCACAGAAGCGTGTTTATGAAGTTGTAGCTAAGCCAGTTGTTGAGAGTGTTCTTGATGGTTATAATGGAACTGTGATGGCTTATGGTCAAACTGGAACGGGGAAAACATTTACTCTTGGACGATTGGCGGAAGAAGACACCTCTGATCGCGGAATCATGGTCCGTTCCATGGAGGATATTTTAGCTGACTTATGTCCAGAAACTGATTCTGTCACTGTCTCATATCTGCAGCTTTACATGGAGACTCTCCATGACTTGCTTAATCCAGCAAATGATAATATTCCCATAGTGGAGGATCCCAGAACTGGTGATGTGTCTTTGCCTGGGGCAACTCTTGTCGAAATCAGGAATCAGCAAAGTTTCTTGGAATTGCTAAAAGTAGGAGAAGCTAATCGAGTTGCTGCTAACACGAAGTTGAACACTGAATCTTCTCGTAGTCATGCTATACTGACGGTAAATGTTAAGAGGTCTGTCATGGAAAATGAAGATACTGTTTCTACTGAAAATGATGATGCCTCTCACTTGACTAGACCTTCAAAACCACTTATTCGAAAGAGCAAGCTGGTTGTCGTAGATTTGGCAGGATCAGAGCGTATCCATAAGTCAGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATATATCAATCTTTCTCTTAGTGCACTTGGAAAATGTATTAATGCTCTAGCTGAGAGCAATGCTCATGTTCCATTTCGTGATTCAAAGCTCACTAGGTTGCTCAGAGATTCCTTTGGAGGAACAGCACGGACATCATTGATTGTGACTATTGGCCCATCTCCACGTCATCGAGGAGAAACTTCTAGTACCATATTGTTTGGTCAAAGGGCTATGAAAGTTGAAAATATGCTGAAAATAAAAGAGGAGTTTGATTATAAAAGTTTGTCTCGGAGGCTTGAGGTGCAATTAGATAAGCTTATTGCAGAAAATGAAAGGCAGCAGAAGGCTTTTGAGGATGAAGCTGAAAGAATAAATTTGGAGGCGCAATATCGTATTGCTGAGGTTGAGAGGAAATTTGCAGATGCACTAGAGAAAGAGAGATTGAAATGCCAGATGGAGTACATGGAATCAGTTAAGCAGCTGGAGCAAAAGTTGGTGTCAAGTCAAGAAAAACATGCTTGCAATTGTTTTGTGGATGGTTGTGGAGAGGGGCTTACACCATCTCCTGCCAATGAAGTTGCTGAGGTGAAAAAGCAGTTTGAAAATGAAAGCAATAGGAGAAGGGCAGCTGAAGCAGAGGTAGAACATCTGAAATGTCAGTTGGAGAAATATACAAAAGCAGAGGCAGGAGGGGATGCAGGGATCGTGAAGCTTCACAGTATCCTGGAGGATGAGGCTAACCAGAAAAAGAAACTTGAAGAAGAAATAATAATATTAAGAAGCCAATTACTGCAATTAAACTTTGAAGCTGACCAGATGAGAAGGTGTTTAGAAAGTGAAAGCTCTGTCAGTGCATTTCCTGGCATGGATTCTTCCATGTCTCAAGTTAGACATTCCCAACTAAAAGACACTAGGAATGGTCAGAAAGCATCTGTTGCTGCACTCTTTGAGCAAGTTGGATTGCAAAAGATTTTGTCGTTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTAAAAGTGGTGGCCAACCTAGCAGCTGAAGAGGCAAATCAAAAAAGTATTGTTGAAGCTGGTGGCCTCACTTCCTTGCTGATGCTTCTTAGAAGATATGAGGATGAAACTGTTCGCAGAGTAGCAGCAGGGGCAATTGCCAATCTTGCCATGAATGAAGCCAATCAAGAACTTATAATGGCTGAAGGAGGAATTACTCTGTTATCAATGACTGCATCTGATGCTGAAGATGCACAAACTCTTCGAATGGTTGCTGGGGCCATTGCTAACCTGTGTGGAAATGATAAAATAATGATGAAGCTGAGATCCCAGGGAGGCATCAAGGCTTTACTGGGAATTGTAAAATGTGGACATCCTGATGTTCTTTCACAAGTTGCTCGAGGAATTGCCAACTTCGCTAAATGCGAGTCTAGAGCTTCTAATCAAGGGATAAAAAGTGGAAGATCTTTTTTGATAGAAGATGGCGCACTTCCGTGGATAGTACAAAATGCTAATAATGAAGCTGCACCAATCAGGCGTCACATTGAACTTGCACTCTGCCACTTGGCACAGCATGAAGTGAATGCAAAGGACATGATCAGTGGAGGTGCCCTTTGGGAGCTTGTCCGGATTTCACGGGATTGTACACGAGAGGACATAAGGAATCTTGCTCGTCAGACTCTCAGTTGCATCACACCATTCAAATCTGAATTGCGACGATTACGTATAGAGTATTGA 2580 0.4198 MQYCLNKIVEFMILCAVPGRVRVAVRLRPRNNEEMMADADFADCVELQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLAEEDTSDRGIMVRSMEDILADLCPETDSVTVSYLQLYMETLHDLLNPANDNIPIVEDPRTGDVSLPGATLVEIRNQQSFLELLKVGEANRVAANTKLNTESSRSHAILTVNVKRSVMENEDTVSTENDDASHLTRPSKPLIRKSKLVVVDLAGSERIHKSGSEGHMLEEAKYINLSLSALGKCINALAESNAHVPFRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRRLEVQLDKLIAENERQQKAFEDEAERINLEAQYRIAEVERKFADALEKERLKCQMEYMESVKQLEQKLVSSQEKHACNCFVDGCGEGLTPSPANEVAEVKKQFENESNRRRAAEAEVEHLKCQLEKYTKAEAGGDAGIVKLHSILEDEANQKKKLEEEIIILRSQLLQLNFEADQMRRCLESESSVSAFPGMDSSMSQVRHSQLKDTRNGQKASVAALFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKSIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDAQTLRMVAGAIANLCGNDKIMMKLRSQGGIKALLGIVKCGHPDVLSQVARGIANFAKCESRASNQGIKSGRSFLIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVNAKDMISGGALWELVRISRDCTREDIRNLARQTLSCITPFKSELRRLRIEY 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi173g00064 859 SUPERFAMILY ARM repeat 593 853 IPR016024 -
Sebi173g00064 859 Gene3D - 578 856 IPR011989 -
Sebi173g00064 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 601 643 IPR000225 GO:0005515
Sebi173g00064 859 Coils Coil 517 551 - -
Sebi173g00064 859 FunFam Kinesin-like protein 14 392 - -
Sebi173g00064 859 Pfam Armadillo/beta-catenin-like repeat 634 671 IPR000225 GO:0005515
Sebi173g00064 859 ProSiteProfiles Kinesin motor domain profile. 20 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi173g00064 859 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sebi173g00064 859 Coils Coil 433 453 - -
Sebi173g00064 859 FunFam Kinesin-like protein 571 846 - -
Sebi173g00064 859 CDD KISc 20 360 - -
Sebi173g00064 859 SMART kinesin_4 18 370 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi173g00064 859 Gene3D Kinesin motor domain 16 392 IPR036961 -
Sebi173g00064 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 397 IPR027417 -
Sebi173g00064 859 PANTHER KINESIN-LIKE PROTEIN KIF11 21 549 IPR047149 -
Sebi173g00064 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 642 685 IPR000225 GO:0005515
Sebi173g00064 859 Coils Coil 475 509 - -
Sebi173g00064 859 Coils Coil 378 409 - -
Sebi173g00064 859 SMART arm_5 631 672 IPR000225 GO:0005515
Sebi173g00064 859 SMART arm_5 715 755 IPR000225 GO:0005515
Sebi173g00064 859 SMART arm_5 673 714 IPR000225 GO:0005515
Sebi173g00064 859 SMART arm_5 590 630 IPR000225 GO:0005515
Sebi173g00064 859 Pfam Kinesin motor domain 26 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi173g00064 859 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi173g00064 859 PRINTS Kinesin heavy chain signature 96 117 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi173g00064 859 PRINTS Kinesin heavy chain signature 312 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi173g00064 Sebi-Chr173 925350 933523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi173g00064 19 409 Calmodulin-binding Proteins AT5G65930 32.598 4.07e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi173g00064 - K10396 gmx:100793472 1436.78