LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi173g00056	ATGGGAGCTGGTCTGGCACGTGGCTTCCAGTGCGGCGGTTGGAAGCTGGCTGATGCTGTCACCTACACTAACACTACACTCTCTTTGCTTCACGCAAGCCCCTCCTCTTCTCTTTCCTTTCCCTCTATTAGTGAAAGAGGTGGGCCTTGTGGTGCCTGCAAGTTTTTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACCCTTCATTTTGCTGCTGTGCATAAGGTGTTTGGTGCTAGTAATGCCTCTAAGCTACTCATGCGCATCCCAGCACATAAGCGTGTTGATGCTGTTGTTACTCTCTGCTATGAAGCTCTGGCTAGAACTAGAGACCCTGTTTATGGCTGTGTTGCTCACATCTTTGCCCTTCAACAACAGGTAATGAACTTGCAGGCAGAGTTAACCTATGTTCAGGCCCGTCTTGCCACAATGCAGCGTCTTCCACTCCCAGTAGCACCTCCTCTTCCACATCCCCAAACCTCTTCATCAACTAGTCTTCATTCCTCCTCAGATCACTTGACATTAAATGCTGACTTGCAAAGTGCTACTGACCTATCTATGCAATTTGATCCTCTTCAATCACATTCAACATCATTACAATTAAGCACCTTTTTTGATCCATCAGATCAACAACTCGAGGATGGGGAACTCCACGCTTTGGCTCGAGAATTTGTGACTAGGTACTTGCCTGGACATCTGGCATCTTTCTCCAGATCAGTTGCCTTCAGAGCCAAGGGGAACCTAAGCAAGACAGATGAGACATTAAAGGATGTAGAACTCAATGAGCAACATGAAGTTTCAAAAGGCACAGTAAGAAAAAGAAGCAAGAATCCTTAA	864	0.4618	MGAGLARGFQCGGWKLADAVTYTNTTLSLLHASPSSSLSFPSISERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTLHFAAVHKVFGASNASKLLMRIPAHKRVDAVVTLCYEALARTRDPVYGCVAHIFALQQQVMNLQAELTYVQARLATMQRLPLPVAPPLPHPQTSSSTSLHSSSDHLTLNADLQSATDLSMQFDPLQSHSTSLQLSTFFDPSDQQLEDGELHALAREFVTRYLPGHLASFSRSVAFRAKGNLSKTDETLKDVELNEQHEVSKGTVRKRSKNP	287

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi173g00056	287	ProSiteProfiles	LOB domain profile.	48	150	IPR004883	-
	Sebi173g00056	287	MobiDBLite	consensus disorder prediction	160	179	-	-
	Sebi173g00056	287	PANTHER	LOB DOMAIN CONTAINING PROTEIN	45	202	-	-
	Sebi173g00056	287	Pfam	Lateral organ boundaries (LOB) domain	49	147	IPR004883	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi173g00056	Sebi-Chr173	795749	805292	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi173g00056	47	240	AS2 family	AT4G00210	57.143	1.14e-73	223

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Sebi173g00056		LOB	1.3e-36	No_clan