Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi173g00054 ATGGAAGGTAGAGAAGGTATTAGTTCTGGGGTTACAGTTATAGGGGCAGAAGCTCCTTCATCTTATCATGTGGCACCAAGGAGTGAAGCTCCAAACCAGGTTCATGTCTCTGATGCAGCAGCAGCTGCTGCTGGAGCTATTGGTGTCTCCCCAGTGAGTGTGGGGTTGGATGGATCAGCAGTTAAGAAGAAACGGGGTAGACCAAGGAAGTATGGACCAGATGGGTCTGTCACTATGGCATTGTCACCAATGCCAATCTCATCTTCAGCTCCACCCTCTAATGACTTTTCATCTGGGAAACGCGGGAAACCGCGTGCGATGGAATACAAGCCGTCAAAAAAAGTTGGATTGGATCATTTTGGTGACATGAATGCATGCTCAGATGGTACCAACTTTATGCCGCACATAATTACTGTGAACGCTGGCGAGGTATGCTTCACAGGGGGGCAGGACAAGGGTTTTAGCTTCATTTAG 474 0.4831 MEGREGISSGVTVIGAEAPSSYHVAPRSEAPNQVHVSDAAAAAAGAIGVSPVSVGLDGSAVKKKRGRPRKYGPDGSVTMALSPMPISSSAPPSNDFSSGKRGKPRAMEYKPSKKVGLDHFGDMNACSDGTNFMPHIITVNAGEVCFTGGQDKGFSFI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi173g00054 157 MobiDBLite consensus disorder prediction 81 96 - -
Sebi173g00054 157 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 29 143 IPR039605 GO:0003680
Sebi173g00054 157 MobiDBLite consensus disorder prediction 61 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi173g00054 Sebi-Chr173 766706 767890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi173g00054 10 143 AT-hook Motif Nuclear Localized (AHL) Family AT4G22770 44.521 1.01e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi173g00054 - - gmx:100796830 229.18