Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi173g00053 ATGAAGGTGATATCCTTTTCTCAACAAGGACCCCGAGCTATATGCATCTTATCTGCTACTGGTGTAATTTCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGTACTTTGACCTATGAGGGCCGTTTTGATATACTTTCCTTGTCGGGATCCTTCATGCCTACTGACAGTCAAGGAACACGAAGTAGATCTGGTGGGATGAGTGTCTCGTTGGCCAGTCCGGATGGTCGTGTTGTAGGTGGCGGAGTTGCTGGTCTTCTCATAGCTGCCGGTCCTGTTCAGGTGGTAGTGGGAAGTTTCCTACCAAGCAGCCAGCAAGATCAGAAACCAAAGAAGGCCAAGTCTGATTATGCAGCAGCCACTGTTACTCAAGCCAATGCAGTATCTTCTGCTCCACCACCCCCAACTAATGCTGAAAAAGAGGATGTCATGGGTGGACATGTACTCCAAAATTCTGGAACCCTTAACTCAAACCTTACTTCTCCTCCAAATGCCTTTAGAAGAGACAACTGGGTCAACATGCACTCTATGCCAGACTCAAGGAAGTCAGCTACTGATATTAACATATCTCTTCCTGATAGTTAA 588 0.4643 MKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFDILSLSGSFMPTDSQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAAGPVQVVVGSFLPSSQQDQKPKKAKSDYAAATVTQANAVSSAPPPPTNAEKEDVMGGHVLQNSGTLNSNLTSPPNAFRRDNWVNMHSMPDSRKSATDINISLPDS 195
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi173g00053 195 Gene3D - 1 125 - -
Sebi173g00053 195 SUPERFAMILY AF0104/ALDC/Ptd012-like 5 105 - -
Sebi173g00053 195 CDD DUF296 2 101 IPR005175 -
Sebi173g00053 195 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 169 IPR039605 GO:0003680
Sebi173g00053 195 ProSiteProfiles PPC domain profile profile. 1 124 IPR005175 -
Sebi173g00053 195 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 101 IPR005175 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi173g00053 Sebi-Chr173 763194 764514 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi173g00053 1 132 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 78.195 1.51e-66 206
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi173g00053 - - gmx:100793726 322.783