Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi173g00013 ATGTCCAACAATATTACTAAGTTTCTAAGCAACAATCTGGTTCTCAACAAAGTTCAATATCAAGAACCAAGTTACAGAGATGGGTTCCCAACATGGGTTAAGCCAGGTGACCGCAAGTTGTTGCAGGCATCTTCTCCAGCTTCTCAGGCTAATGTAGTTGTGGTGAAAGATGGCTCTGGAAAGTACACAACTGTCAGTGCAGCCATAAATGTTGCTCCACAAAGTAGCAGTGGAAGGTATGTGATATACATGAGGGCAGGAATATATAATGAGCAAGTTGAGATCAAGGCAAAGAATATAATGTTGGTGGGAGATGGCATTGGAAAGACCATAATCACAGGTAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCATTCTGCAACTATTGCTGTTATTGGGGATGGATTTATTGCACAAGATATCACATTCAGGAACACTGCTGGTGCAGCAAACGACCAAGCTGTTGCATTGCATTCTAGATCTGACTTATCAGTCTTTTATAGATGCAGCTTTGAAGGTTACCAAGACACACTGTATGTGTACTTTGACAGACAATTCTATAGGGATTGTGACATCTATGGTACAGTTGATTTTATCTTTGGCAATGTTGTTGTGGTGTTCCAAAATTGCAACCTCTTTGCAAGAAACGATCGAAATCAGAACACTGGCATTTCCATTCACAATTGCAGAGTGACAGCTGCCTCAGATTTGAAACCAGTTCAACGCTCAGTAAAAACTTACCTTGGAAGGCCTTGGCAACAGTACTCAAGGACAATATTCATGAAAACATATCTTTATAGTTTGATCAATCCAGCAGGTTGGATGGAATAG 834 0.4101 MSNNITKFLSNNLVLNKVQYQEPSYRDGFPTWVKPGDRKLLQASSPASQANVVVVKDGSGKYTTVSAAINVAPQSSSGRYVIYMRAGIYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFHSATIAVIGDGFIAQDITFRNTAGAANDQAVALHSRSDLSVFYRCSFEGYQDTLYVYFDRQFYRDCDIYGTVDFIFGNVVVVFQNCNLFARNDRNQNTGISIHNCRVTAASDLKPVQRSVKTYLGRPWQQYSRTIFMKTYLYSLINPAGWME 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi173g00013 277 PANTHER PECTINESTERASE 3 277 - -
Sebi173g00013 277 ProSitePatterns Pectinesterase signature 2. 193 202 IPR033131 -
Sebi173g00013 277 FunFam Pectinesterase 4 48 277 - -
Sebi173g00013 277 Pfam Pectinesterase 51 277 IPR000070 GO:0030599|GO:0042545
Sebi173g00013 277 SUPERFAMILY Pectin lyase-like 45 276 IPR011050 -
Sebi173g00013 277 Gene3D - 46 277 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi173g00013 Sebi-Chr173 299259 300206 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi173g00013 1 277 Carbohydrate Esterase AT2G45220 66.438 1.91e-138 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi173g00013 K01051 - gmx:100783428 464.151