Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi173g00004 ATGGCTCTGGAAAGGACATACAATGAGCAAGTTGAGATAAAGGCAAAGAATATAATGTTGGTTGGAGATGGCATTGGAAAGACCATAATCACAGGTAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGATCCGCCACTGTTGCTGTTGTTGGGGATGGATTTATAGCTCAAGATATCACATTCAGGAACACTGCTGGTGCAGCAAACCACCAAGCTGTTGCATTGCGTTCTGGATCTGACTTATCTGTCTTTTATAGATGCAGTTTTGAAGGTTATCAAGACACACTGTATGTGCACTCTGAGAGACAATTCTATAGGGAGTGTGACATCTATGGTACAGTTGATTTCATTTTTGGTAATGCTGCTGTGGTGTTCCAAAATTGCAACCTCTTTGCAAGAAACCCTCCAAACAAAGTTAACACAATCACTGCTCAAGGAAGAACCGATCCAAATCAGAACACTGGGATTTCCATTCACAATTGCAGAGTGATAGCTGCCTCAGATTTGAAACCATCTCAAGGCTCAGTAAAAACTTACCTTGGAAGACCTTGGCAACAGTACTCAAGGACAGTATTCATGAAGACATATCTTGATAGTTTGATCAATCCAGCAGGTTGGATGGAATGGAGTGGTAATTTTGCCTTAAGCACTCTGTACTATGGAGAGTACATGAACACAGGACCAGGTTCTTCAACCACAAACAGAGTTAACTGGTCAGGATATCATGTCATTACCAGCGCTTCTGAAGCCTCAAAATTCACTGTTGCTAATTTTATTGCTGGAAACTCGTGGCTACCATCCACCCGTGTGCCCTTCACCTCTACTTTATAA 834 0.4245 MALERTYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQDITFRNTAGAANHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVFQNCNLFARNPPNKVNTITAQGRTDPNQNTGISIHNCRVIAASDLKPSQGSVKTYLGRPWQQYSRTVFMKTYLDSLINPAGWMEWSGNFALSTLYYGEYMNTGPGSSTTNRVNWSGYHVITSASEASKFTVANFIAGNSWLPSTRVPFTSTL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi173g00004 277 Pfam Pectinesterase 6 263 IPR000070 GO:0030599|GO:0042545
Sebi173g00004 277 Gene3D - 3 277 IPR012334 -
Sebi173g00004 277 PANTHER PECTINESTERASE 4 267 - -
Sebi173g00004 277 ProSitePatterns Pectinesterase signature 2. 111 120 IPR033131 -
Sebi173g00004 277 SMART complete 2 179 IPR006633 -
Sebi173g00004 277 FunFam Pectinesterase 3 277 - -
Sebi173g00004 277 SUPERFAMILY Pectin lyase-like 6 276 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi173g00004 Sebi-Chr173 105770 106813 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi173g00004 7 277 Carbohydrate Esterase AT2G45220 77.491 2.85e-156 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi173g00004 K01051 - gmx:100783964 501.13