Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00157 ATGTTCTTCATCCAGGCTGAGTTAAAGGAGAAACTGGCAAGAATGTATGAAGTGAAGGACCCAAACACTCTATTTGTTTTCAAATTCCGAACTCACTTTGGAGGTGGTTTTGGTTTGATTTATGATTCGGTTGAGAATGCAAAGAAGTATGAGCCCAAGTACATGCATATCAGGGGGGGGGAGAGGGTTTAG 192 0.4219 MFFIQAELKEKLARMYEVKDPNTLFVFKFRTHFGGGFGLIYDSVENAKKYEPKYMHIRGGERV 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00157 63 PANTHER 40S RIBOSOMAL PROTEIN S24 5 60 IPR001976 GO:0003735|GO:0005840|GO:0006412
Sebi172g00157 63 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 60 IPR012678 GO:0003735|GO:0005840|GO:0006412
Sebi172g00157 63 Pfam Ribosomal protein S24e 6 60 IPR001976 GO:0003735|GO:0005840|GO:0006412
Sebi172g00157 63 Gene3D - 3 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00157 Sebi-Chr172 1627556 1628057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00157 5 60 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 76.667 2.20e-28 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00157 K02974 - gmx:100802918 101.679