Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00156 ATGATCATTGATGTCCTTCATCCAGGGAGGGCAAATGTTTCCAAGGCTGAGCTTAAGGAAAAGTTGGCTAGAATGTATGAAGTGAAGGACTCTAATACCGTATTTGTCTTCAAATTCCGAACACATTTTGGTGGTGGCAAATCCACTGGTTTTGGTTTGATTTATGATTCAGTTGAGAATGCGAAGAAGTATGAGCCTAAGTACAGGCTTATCAGGAATGGTCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGGAAGAATAGAGCTAAGAAGATTCGTGGAGTAAAGAAGACCAAGGCTTCTGATGCTGCCAAGGCTGGAAAGAAGAAATGA 345 0.4116 MIIDVLHPGRANVSKAELKEKLARMYEVKDSNTVFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00156 114 ProSitePatterns Ribosomal protein S24e signature. 43 65 IPR018098 -
Sebi172g00156 114 Pfam Ribosomal protein S24e 3 80 IPR001976 GO:0003735|GO:0005840|GO:0006412
Sebi172g00156 114 PANTHER 40S RIBOSOMAL PROTEIN S24 1 108 IPR001976 GO:0003735|GO:0005840|GO:0006412
Sebi172g00156 114 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 85 IPR012678 GO:0003735|GO:0005840|GO:0006412
Sebi172g00156 114 Gene3D - 1 109 - -
Sebi172g00156 114 MobiDBLite consensus disorder prediction 79 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00156 Sebi-Chr172 1624996 1626312 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00156 1 109 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 86.239 8.64e-68 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00156 K02974 - sly:101244617 193.741