Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00153 ATGTTTGATGGAGCAGCAGATCATCATCATCAGTTCCACCACCAATTGGTAGCACCACCAACACCAACACCAAGGACCACTCTTCCCCTTCACTTATCCTTCCCCTCTTCTACATCCCCAACCCCCAATCATTCCTTCCTCCCTAATTTTGATCCCTATAACCCCACTCCTCCTAATTTCCCACTCCAAACCAATATTCTCTTGCCCCACAAACATCAACACCAACCCAAACAACCAAACACCACCCTCGATATTGAAACAGATCAAAGACAATTACCACCAAAGTTGCTTGATTCCTGGACCAACGATGAAGTCCTTGCACTCTTGAGGATCAGATCTACCATGGACAATTGGAAGCTAGCAGAGCTTGGGTTTAAGAAAAGTGCAGAGAAGTGCAAGGAGAGGTTTGAAGATGAAACCGGATATTTCAACAATTTGGGCAAGACTAGTTATCGTTTTGTTAGTGAACTTGAAGAGCTTTATCATCAACAAAACCCTCATCATGATCAAGTTGTTACTGAAAAGACAATGGAAGGAGAAGGAGGAGACAGCATGGGCCACACATTGGAAGAAAATTCCACAGATATTAATAAGATGGTGGTTGAAAAGTCAAGGAAGAGGAAGAGACGTGATAAGTTTGAAATGTTGAAAGGGTTTTGTGAGAGCATTGTGAACAAGATGATGGCTCAACAAGAAGAAATACACAATAAGCTTCTCCATGAGATGCTCAAGAGAGATGAAGAGAAGCTTGCAAGAGAGGAAGCTTGGAAAAAACAAGAGATGGATAAGTTCAACAAAGAGCTTGAGATTATGGCACAAGAACAAGCTATTGTTAGTGATAGGCATGCCACCATCATTCAATTCTTGAACAAATATCTATCATCTTCAACATCAACAACAACTTCTTCCCCTCCCAAGTGCAAAACAAAAGGAAATTCTTCCCCAATATTAACACACTCGCAAAACCCTAATCCTTGTAATTTGGTAAAATTGGGTGGAGAAAACCCTAGGTCAAGTGAGACAACAATATTGTTACAACAAGTTGTTGTTCCTTCTAATTCTTCCAATTCAATTAGCACAATGCAAAAAAACAGTTGTTATGAGAAAGAGGATGTTGGGAGAAGATGGCCAAGAGATGAGGTGTTAGCATTGATAAAGTTGAGGTGTAGTGTGATGAATAGTAATGAAGAGGAGAAGGAGGGAAATAATAATAAGGGACCTCTTTGGGAGAGAATCTCGCAAGGGATGTCAGAGTTGGGATATAAGAGAAGTGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTTAGAAAAACCAAAGATAATAAGAAAAGGTCCCTCGACTCTAGGACATGTCCCTACTTCCATCAATTGACCTCTTTGTATAGTCACGAAAAACTATCTCATTCTGATCATCATCATCACTTAAATCCAACCGTCAATTCTGGAGAAGTGCCACCAGATTCAGATCATCAAGCCCAATTACCTGCTGAGTCCTAG 1509 0.4056 MFDGAADHHHQFHHQLVAPPTPTPRTTLPLHLSFPSSTSPTPNHSFLPNFDPYNPTPPNFPLQTNILLPHKHQHQPKQPNTTLDIETDQRQLPPKLLDSWTNDEVLALLRIRSTMDNWKLAELGFKKSAEKCKERFEDETGYFNNLGKTSYRFVSELEELYHQQNPHHDQVVTEKTMEGEGGDSMGHTLEENSTDINKMVVEKSRKRKRRDKFEMLKGFCESIVNKMMAQQEEIHNKLLHEMLKRDEEKLAREEAWKKQEMDKFNKELEIMAQEQAIVSDRHATIIQFLNKYLSSSTSTTTSSPPKCKTKGNSSPILTHSQNPNPCNLVKLGGENPRSSETTILLQQVVVPSNSSNSISTMQKNSCYEKEDVGRRWPRDEVLALIKLRCSVMNSNEEEKEGNNNKGPLWERISQGMSELGYKRSAKRCKEKWENINKYFRKTKDNKKRSLDSRTCPYFHQLTSLYSHEKLSHSDHHHHLNPTVNSGEVPPDSDHQAQLPAES 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00153 502 MobiDBLite consensus disorder prediction 295 324 - -
Sebi172g00153 502 ProSiteProfiles Myb-like domain profile. 375 436 IPR001005 -
Sebi172g00153 502 PANTHER FI21293P1 77 490 - -
Sebi172g00153 502 Gene3D - 376 441 - -
Sebi172g00153 502 MobiDBLite consensus disorder prediction 1 54 - -
Sebi172g00153 502 MobiDBLite consensus disorder prediction 27 50 - -
Sebi172g00153 502 Pfam Myb/SANT-like DNA-binding domain 374 463 IPR044822 -
Sebi172g00153 502 FunFam Trihelix transcription factor GTL2 376 441 - -
Sebi172g00153 502 CDD GT1 374 443 - -
Sebi172g00153 502 MobiDBLite consensus disorder prediction 175 196 - -
Sebi172g00153 502 MobiDBLite consensus disorder prediction 469 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00153 Sebi-Chr172 1589308 1591087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00153 100 467 Trihelix Transcription Factor Family AT5G28300 41.702 1.10e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi172g00153 Myb_DNA-bind_4 1.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00153 - - gmx:100801868 497.278