Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00152 ATGGGGAAGGCAGGCAAATGGATTAGAAACTTACTTCTAGGGAAAAAAGAAGAGAAATTCAAGAAGATTGATACATTATGCCCTGAGAATAAAACTGCTACCAAAGTGAAGCGCAGATGGAGCTTTGGAAAACTTGCAGGTGGAAGAATAACAGGCAAGGTAGCAGAAAATCATAAATTTTCCAGATCTTTTGACTCCGGTGACTCTGCAAAATTGCAAATCCGAGTCTTGTTGGAAACTAAGAATCCAAGGTATCTTCCAACATCACTTGCAAAGGTTTATGAAGACACTGAATTTGAAACAGCAGCTGCTACAAGGATTCAAGCTGCTTTTCGCTCATATTTGGCAAGGAAAGCATTGCATGCTTTAAGGGGATTAGTCAAGATACAGGCATTGGTCAGGGGTCATCTTGTAAGGAAACAAACAACTGCCACACTGCGTGGCATGCATGCGTTGATGGCTATACAAGTTAGAGCCCGAATTCAGAGAATTCAGATGGTCGAGGAAGCAAATCTCCTCGGAAAACAGCCTCCCCAACATAGAGAAATTCCACACATGAAAGGTCTCATATCAGAAGAAAAACAAGATTCTGAGGATATGAGTCTGAAAGATATGTTAGGGGTTTTGAAAAGTAGAAGTGGCCCTCTAGATGGTTCGCATGTTAAGAGCAGAAAGTATGATTCCATGGCTTTCTATTCGAAGCATCTGTCAAGTTCGAAACGAGAAAATCAACACAAGCAGAACACTTTAGTCACAGCACCAAACAGTCCAGCAAACTACAGGGACATGTCTGAATTTAACCCAACAACAATGGCGTTATCAACTTCTCAGCGCCACCTAGTGCCTCACCGCCAATCATGGTCACCAAATTACATGAACAAGACTGAATCTTCAAGGGCAAAAGCAAGGTCTCGGAGTGAACCAAAACAACGACCCAAACAGGGAATGAAGAACAAAAGCAAGTTTGTAGAATCTCCATTGCATGGTCCAAGGCAAAACCTGTTCTCAAACTCGTCACGGTTCGATCATGGAAGCCTGGACCATTGGGTTATTAATCTTCATGGATCAATGAAGGAAAGCAAGCGTGATTCTTTTGGCAGCAGCACGATGACCAGTGATTCCTGCTACTGA 1131 0.4262 MGKAGKWIRNLLLGKKEEKFKKIDTLCPENKTATKVKRRWSFGKLAGGRITGKVAENHKFSRSFDSGDSAKLQIRVLLETKNPRYLPTSLAKVYEDTEFETAAATRIQAAFRSYLARKALHALRGLVKIQALVRGHLVRKQTTATLRGMHALMAIQVRARIQRIQMVEEANLLGKQPPQHREIPHMKGLISEEKQDSEDMSLKDMLGVLKSRSGPLDGSHVKSRKYDSMAFYSKHLSSSKRENQHKQNTLVTAPNSPANYRDMSEFNPTTMALSTSQRHLVPHRQSWSPNYMNKTESSRAKARSRSEPKQRPKQGMKNKSKFVESPLHGPRQNLFSNSSRFDHGSLDHWVINLHGSMKESKRDSFGSSTMTSDSCY 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00152 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 142 IPR027417 -
Sebi172g00152 376 Gene3D - 99 154 - -
Sebi172g00152 376 PANTHER IQ-DOMAIN 5-RELATED 1 332 - -
Sebi172g00152 376 Pfam Protein of unknown function (DUF4005) 256 320 IPR025064 -
Sebi172g00152 376 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Sebi172g00152 376 MobiDBLite consensus disorder prediction 236 260 - -
Sebi172g00152 376 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Sebi172g00152 376 MobiDBLite consensus disorder prediction 298 318 - -
Sebi172g00152 376 MobiDBLite consensus disorder prediction 274 297 - -
Sebi172g00152 376 Pfam IQ calmodulin-binding motif 127 141 IPR000048 GO:0005515
Sebi172g00152 376 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Sebi172g00152 376 SMART iq_5 122 143 IPR000048 GO:0005515
Sebi172g00152 376 SMART iq_5 99 121 IPR000048 GO:0005515
Sebi172g00152 376 MobiDBLite consensus disorder prediction 274 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00152 Sebi-Chr172 1571240 1572750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00152 1 345 IQD Protein Family AT4G14750 36.056 9.02e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00152 - - gmx:100781320 511.146