Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00148 ATGTCGAGTTCAAGGGTAACCCTGCACTCAAAACTAACGGCCGTTTCCAGCAAACCCGTTAGGTCGGGTAAGACCCATACCCTCTCGGCGTTGGACCATGCCATGGGTTTTCACACCCTTCACATAATATTCTACTACAAGAATGAGGGCAACAATTTGTTTGAGTCCTTTGATTTGGACCCGTTGAGGGAATCATTGTCTGAGGTTCTTACAATGTACCCGACCATGACGGGTCGGTTAGCCCGAGGGGTGGATGGTAACTGGGAAGTAAGGTGCAATGATGCGGGTGTTCGGGTCATAATGGCAAACGTGGATACCACACTCAATGAGTGGCTCTCATCTGCTTCTGGATCCGAAGAGGAACATCTAATTGCTTGGGATGATATGCCTCATGATCCTCACACATGGTCACCCTTTCGAATTCAGATAAACAGCTTCAAAGAAGGAGGTGTTGCAATAGGACTAAGTTGTAGCCACATGCTTGCTGATCTAACTTGTGCTGCATTATTCTTCAAATCATGGACTGAAACTCACCGCCACTTACCTATTACCCACCCTCCTTTCTTCACTCCAATTCGTGCTTCACCACTTCCAAACTCGGATACAGAGTCTCTCCCTCTCAATGCAACAAAAGCACAAATAATGGCCTCTTCAAGAAACATGGCCACAGCCACTTTCAAATTTTCCAGTTCAATTATGAAGCAATGTCTCTCCAAAGTCCATGACACATGCCCCAATGCCACCCCTTTTGATTTCCTCTCTGCTCTGTTTTGGACTCGCATTGCTCGCTTGAAGTCCCCAAAAAATCAGGACCAAACCCACTCTCTATCAATCTGCACTGACTTCAGGAGACTCATGAAACCACCCCTCCCAATTGGGTATTTCGGCAATGCGTTACATTTTTCAATGATTTCAGTAAAAGTGGAAGACATAGAGAGTGAGCAATTAGGAGGCATAGCTAGTAAAGTGCATAACCACTTGGCAGAGCTAGCAGAGGAAGAAATAAGGTATGCTATGGAATGGTTAGGGTCAGAAAAGGAAAGAGAGGGAGGGAAATTCAGATATGGGAGTGAGTTAACTTGTGTTTGCATGGAGCACATGATGATTTCTTCTGAACAGTCGTTGCTATATGAAGCAATGTTTAGCAGTAATGAGAAGCCAGAACATGTGTCATGTCATGTGGGGAATGTGGATGGTGAAGGATTGATTATGGTGATGCCTTCCTCAGAAGGAGGACTTGCAAGAACGGTGATGGTGACGCTGCCACAGGAAGAATTAGCTAAAGTAAGCAAGGATCAAGCAATATTGCAGTTGGAGCCAATAATGATCCTTGCTGGTTGTGGGGTTGAGGAAAATCATTGA 1362 0.4523 MSSSRVTLHSKLTAVSSKPVRSGKTHTLSALDHAMGFHTLHIIFYYKNEGNNLFESFDLDPLRESLSEVLTMYPTMTGRLARGVDGNWEVRCNDAGVRVIMANVDTTLNEWLSSASGSEEEHLIAWDDMPHDPHTWSPFRIQINSFKEGGVAIGLSCSHMLADLTCAALFFKSWTETHRHLPITHPPFFTPIRASPLPNSDTESLPLNATKAQIMASSRNMATATFKFSSSIMKQCLSKVHDTCPNATPFDFLSALFWTRIARLKSPKNQDQTHSLSICTDFRRLMKPPLPIGYFGNALHFSMISVKVEDIESEQLGGIASKVHNHLAELAEEEIRYAMEWLGSEKEREGGKFRYGSELTCVCMEHMMISSEQSLLYEAMFSSNEKPEHVSCHVGNVDGEGLIMVMPSSEGGLARTVMVTLPQEELAKVSKDQAILQLEPIMILAGCGVEENH 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00148 453 SUPERFAMILY CoA-dependent acyltransferases 27 191 - -
Sebi172g00148 453 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 26 435 - -
Sebi172g00148 453 Gene3D - 204 431 IPR023213 -
Sebi172g00148 453 Pfam Transferase family 5 433 - -
Sebi172g00148 453 Gene3D - 1 203 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00148 Sebi-Chr172 1544085 1546782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00148 37 431 Monolignol Biosynthesis Gene Families AT5G48930 25.672 4.28e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00148 - - lja:Lj1g3v4958860.1 651.358