Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00136 ATGGAAAGGGTTTTCTCAGTGGATGAGATATCGGAGGAGTATTGGTCGGCGGCGAGGGATGAATCATCGTGTAAGTCAAAGTCAAAGATGAATCGAAGCGCTTCGGAATGGGCCTTCCAGCAGTTTCTAAAAGAAGCTTCATCTTGTGGTGTAGCAGCAGAGGCTTGTTCTTCCTCTGTTGATGATGTCAAACTCAAAAAGGATCCAAGTCCAACCACCACAGCCACAGCACCTCTTGATTCTGAAGACTACCAAGCTATTCTCAAGACCAAGCTCAATCTCGCTTGCGCCGCCGTCGCTTTGACTCGGGGAACTTTGGTCAAAACTCAAGATCCTGCCACTCTTCCTGACAGTGGATCACAGGCATCTAATCCTTCTGAAGTTGGGTCTCGGGCTACTTTAAAAGAATCCGGCTCTTCTGAAAATGATCCATCTAAATTACAAAATAAAGATGTCAAAGTACCAGTTGGGGTTCCTTCCATGCAGAGGAAACCTGCTATTGCAGTGAGGTCAACAACAAGTGGATCATCAAAAGAACAGTCAGATGATGAGGAAGCTGAGGGAGAGATTAATATGAGTGGAAACATGAACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCTGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTTGAGACACAGGTATCTCAATTAAGAGGTGAAAATTCTTCATTGATGAAGCGCTTGACGGATGTGAGCCAGAAATACAATGATGCTGCTGTTGACAACAGAGTATTGAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACTGGGTTGAACCCAATGTTTAATGCCATGAGTGAGATATCATCAATGGGAATGCCATTATATGATGGAAGCCCTTCTGAGGCATCAGCTGATGCATCTGTTCCTGTACAAGAAGACCCAAATCATCACTTTCGTCAACCAACTTCTAATAATGGTATGTCCAGTCAAGATCTGAGAGTCAACAATGGCATTTCTTCAGTTGAAAATGTGCAGCAGAACAATGCAACAGTGGTAGGTGGGAACAAGATGGGGAGAACAAGTTCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGCGGTGGTGCAGATTCATGTGGACCTTCTCCTAATGAAGAACAATAA 1206 0.4453 MERVFSVDEISEEYWSAARDESSCKSKSKMNRSASEWAFQQFLKEASSCGVAAEACSSSVDDVKLKKDPSPTTTATAPLDSEDYQAILKTKLNLACAAVALTRGTLVKTQDPATLPDSGSQASNPSEVGSRATLKESGSSENDPSKLQNKDVKVPVGVPSMQRKPAIAVRSTTSGSSKEQSDDEEAEGEINMSGNMNPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLMKRLTDVSQKYNDAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFNAMSEISSMGMPLYDGSPSEASADASVPVQEDPNHHFRQPTSNNGMSSQDLRVNNGISSVENVQQNNATVVGGNKMGRTSSLQRVASLEHLQKRIRGGADSCGPSPNEEQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00136 401 CDD bZIP_plant_GBF1 203 254 IPR045314 GO:0003700|GO:0006355
Sebi172g00136 401 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Sebi172g00136 401 MobiDBLite consensus disorder prediction 107 201 - -
Sebi172g00136 401 MobiDBLite consensus disorder prediction 59 79 - -
Sebi172g00136 401 SUPERFAMILY Leucine zipper domain 202 252 IPR046347 GO:0003700|GO:0006355
Sebi172g00136 401 PANTHER BASIC LEUCINE ZIPPER 63 1 390 - -
Sebi172g00136 401 FunFam BZIP transcription factor 200 251 - -
Sebi172g00136 401 MobiDBLite consensus disorder prediction 326 341 - -
Sebi172g00136 401 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 254 IPR004827 GO:0003700|GO:0006355
Sebi172g00136 401 Coils Coil 260 280 - -
Sebi172g00136 401 MobiDBLite consensus disorder prediction 308 341 - -
Sebi172g00136 401 Pfam bZIP transcription factor 201 253 IPR004827 GO:0003700|GO:0006355
Sebi172g00136 401 Coils Coil 211 245 - -
Sebi172g00136 401 SMART brlzneu 198 262 IPR004827 GO:0003700|GO:0006355
Sebi172g00136 401 Pfam Basic leucine-zipper C terminal 269 390 IPR020983 -
Sebi172g00136 401 Gene3D - 201 255 - -
Sebi172g00136 401 MobiDBLite consensus disorder prediction 107 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00136 Sebi-Chr172 1460457 1464691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00136 1 291 bZIP Transcription Factor Family AT4G02640 40.000 6.68e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi172g00136 bZIP_C 2e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00136 K25784 - gmx:778137 514.227