Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00129 ATGAACCCTGCACCAGTTTGCAGGAAGTGCATATATGAGAAGCTTTCAGATGAGGAGGTGGATTGCTGTCCAGTATGCAATATTGATCTGGGCTGCCTTCCAGTGGAAAAACTCAGGCCTGATCACAATTTGCAAGATATTAGGGCCAAAATATTCCCTTTTAAACGAAAAAAGATCAATGCCCAAGAAGTTGTTCCTTCAGTATCCCTGCCAGCAAAAAGGAAGGAAAGGTCACTTTCATCATTGGTGGTTAGTGCTCCCAAAGTTTCAACACATACTAGTTTTACAGGAAAGAGAACAAAAACTGGTACAAGAAAGCCTGCTGCTTTACGTGGATGCAATTTTATCCTTGAAGAAACCATAAAGACAGAGGAAACACATGGTGAAGATGATCTGGATTCTTCCATAGCTGAGCCTTCTAAGAAGCATAGGCCCAATGAAGATACAGAGAATAGTATGGACCTTACAGAAGGGAAGGCTGATCTCTGGACGCCCTTGAACTGTCTTGTTGAAGTAGCCAATAGAACAAAGGCCTCCAGGTCAAATTCACATGGGACCTCTCTTGCCAAATTAGAGTCTCCAACTACTCCTCATGGTGGACAAGAGATGTCTGAAATTATAACCAAATCAGAGCTACCTACTTCTGTCCACAGTGGATTACATATGCCCAAAACCAAAACAAAAAACAAGGATAATGGACATAAAACAAAGGTTGGAGGTGACAAGGATGGAAACACCTTGCCCTCAGGACCAGTGAAGCGAAGAAGGCTGCGTCCTGCTGGTCAGAAAAGAGTAACAGCATTCCAGATGTCTGCCTCAGCCCAAGTCATGTTAGATGCAAAAGGGAGCAAATGCAACCGGAAAAACCGTCCTATTTGGTTTTCATTAGTTGCTTCAGAAGACCGGAAAGGAGATGTTCCCTTGCCACAGATTTCAACATGTTATTTAAGAATAAAGGATGGTACCATGCCCGTGTCATTTATTCAAAAGTACCTTGTGAAGAAACTTAATCTTGCCAGTGAAGCAGAGGTGGAAATAATGTGCCGGGGTCAGCCTGTGCTCCCATCTTTGCAACTGCATAACTTAGTAGATCTGTGGTTCTGTACAGGATCAACCTCAAAAAAGATACCGGCATATAGGAGCTCCTCTGCTAAGGACTTTGTGATGAGCGGAGGACCTGATACGGAAGTGACACTGACATGGGAGGATCAGCAGAACATCAACACATTCGGAAGATTGAATAATCGCCTTCACGAGCTTGACGATGACATCAAAATCGCTAAGGAAACAAATGACAACTTGGAGGACGCAAGCAATGAGTTGATCCTCTCAGATGAAGAGGTAGTTCGGTTTCAGATAGGGGAGGTTTTTTCTCATGTGTCAAGGGATGAAGTTGAGAGCAGGTTAGAACAAATGAAAGAGGTGACAAGCCAGAAACTGGGAAAGCTTGAAGAGGAGAAAGAATCTGTGGTTGCTCAGATGGCTGAACTGAAGAAAATTTTGTACGGGAAGTTCAAGGACTCCATCAATCTTGAGGAGGATTAA 1545 0.4343 MNPAPVCRKCIYEKLSDEEVDCCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPFKRKKINAQEVVPSVSLPAKRKERSLSSLVVSAPKVSTHTSFTGKRTKTGTRKPAALRGCNFILEETIKTEETHGEDDLDSSIAEPSKKHRPNEDTENSMDLTEGKADLWTPLNCLVEVANRTKASRSNSHGTSLAKLESPTTPHGGQEMSEIITKSELPTSVHSGLHMPKTKTKNKDNGHKTKVGGDKDGNTLPSGPVKRRRLRPAGQKRVTAFQMSASAQVMLDAKGSKCNRKNRPIWFSLVASEDRKGDVPLPQISTCYLRIKDGTMPVSFIQKYLVKKLNLASEAEVEIMCRGQPVLPSLQLHNLVDLWFCTGSTSKKIPAYRSSSAKDFVMSGGPDTEVTLTWEDQQNINTFGRLNNRLHELDDDIKIAKETNDNLEDASNELILSDEEVVRFQIGEVFSHVSRDEVESRLEQMKEVTSQKLGKLEEEKESVVAQMAELKKILYGKFKDSINLEED 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00129 514 Coils Coil 466 500 - -
Sebi172g00129 514 MobiDBLite consensus disorder prediction 177 215 - -
Sebi172g00129 514 Gene3D - 272 375 - -
Sebi172g00129 514 MobiDBLite consensus disorder prediction 124 155 - -
Sebi172g00129 514 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 6 389 IPR044807 GO:0004842
Sebi172g00129 514 Pfam Prefoldin subunit 404 507 IPR002777 GO:0006457|GO:0016272|GO:0051082
Sebi172g00129 514 MobiDBLite consensus disorder prediction 124 157 - -
Sebi172g00129 514 FunFam Prefoldin subunit 4 397 507 - -
Sebi172g00129 514 Coils Coil 410 447 - -
Sebi172g00129 514 MobiDBLite consensus disorder prediction 177 262 - -
Sebi172g00129 514 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 77 IPR013083 -
Sebi172g00129 514 MobiDBLite consensus disorder prediction 224 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00129 Sebi-Chr172 1388396 1394961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00129 6 319 C3H Transcription Factor Family AT2G30580 41.317 1.21e-61 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00129 K16277 - gmx:100783999 605.905