Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00126 ATGCATACCCGTGCATGTCTCTTGCTTTCTCTTGTGGGTATCCTTGTCTTGTTGAATGGCATTCATGGTGCATGGACAGAGGAGCCAGGATCATTGATCCTGGGTTGTGGGTTGGGTGAAGGAGGTGCCAAAGATGTTGATGGAAGGCAATGGAGCCCTGATGATAAGTTCCTTGAAGCACAAGGTGATGCAATCACATCCAAAGCCTCTTACCAAGACCCTTCTGTTTTGTCTGAGGTTCCATACATGTCAGCTAGAGTTTTCACATCAGAGGCAACATACAAATTCCCTGTTCTACCTGATAAACGCTATTGGCTCAGGCTCCATTTTTATCCATCTCTTTATGGCAGTCTCAACCCTTCTGATTCATATTTCTCCGTGACTGCAAATGGGGTTACGCTTCTCAGCAATTTCAGCGCCTCAATCACTTGTGAGGCCCTCTCACAAGCTTACATTGACAGAGAGTATTCCCTTGCACCTTTGAATACAGATAGTTTGACCCTTACCTTCAAGCCATCTGACAAGTACAAAGGGGCTTTTGCTTTCATCAATGGCATTCAGTTGATCCCAATGCCAGAGTTATTTGATTCTGGTGCATTGGTTGGGTATGCTGACCAAACCGTGGATGTCAAAAGCTTGAATTTGCAAACCATGTTCAGACTAAACGTTGGTGGACAATATATATCTCCCACACAAGATTCTGGCCTTACAAGGATGTGGTATGATGACACACCTTACTTGTATGGTGCAGCCACTGGTGTCACCAACCAAGCTGAAAAGGATGTCCAAATCAACTACCAGACCATGCCACGGTACGTTGCTCCTGCTGATGTCTACTCCACATCAAGATCAATGGGAAATGACAAGGATATCAACATGGGCTTCAATCTCACTTGGATTTTCCAAATTGATCCAAATTCCATGTACCTTACGAGGTTGCATTTCTGTGATTACTATTCTTCCAAAGTCAATGAGATTGTTTTCAATATCTATGTCAACAACCAAACGGCAGAAGCTCAAGCTGATGTGATTGGATGGACAGGAGGTAAAGGGGTGCCAACTTACAAGGACTATGTGGTATATGTCCAAGATGTGGAGGGGGATGAGCAGCTTTGGCTTGCTCTACACCCGGCACCTGATACAATGCCAGAGTTCTATGATGCCATACTCAATGGGGTGGAGATATTCAAGATCAATGACACAAACTTGTCTGGTCCCAATCCTCAACCTTCAGACATGTTCCTCAGGCATCAAGGGGATGGAATGGGTTTCCAAAACCCCAGAGCATATGATAAGAATGCTGTTATTGGTGGAGCTGCTGGAGGTGCTGCTGGTTTTGCCTTAATGGCTGCAATATGTGTTGCTGTCTACCACAAGAAGAAGAGAGCTCCGGGGTCAGACACCCACACAAGCTGGCTGCCCATCTACTTGAACTCACACACAAATGGCAGCAAATCCACCTCATCTGGGAAGAGCATTGCTAATGGCAACCTCTCTGTTATGGCTCAAGGTCTTTGCCGCTATTTCTCCTTACAAGAGATAAAGCATGCAACCAAGAATTTTGATGAGTCCAACGTTATTGGGGTTGGTGGATTTGGAAAGGTTTACAAGGGTGTCATTGATAATGGAACGAAGGTGGCAATTAAGAGGTCTAATCCACAATCAGAACAAGGAGTTAATGAATTCCAGACTGAAATTGAGATGCTTTCCAAACTGAGACACAAGCATTTGGTGTCCTTGATTGGATTTTGTGAGGAAGATGATGAGATGTGCCTGGTTTATGACTACATGGCTCTTGGAACCTTTAGGGAACATTTGTATAAAGGCAACAAGCCTTTGTCTACTCTATCATGGAAGCAAAGGCCTGTTTTGAATCCTAATCTTCCAAAGGAACAGGTTAGTCTTGCTGATTGGGCATTGATCTGCAAACAAAAAGGAACGCTAGAGGATATTATAGACCCACATATCAAGGGAAAGATTAATCCAGAAAGCTTGAAAAAGTTTGTAGACACAGCTGAAAAGTGTTTGTCTGACAGTGGACTTGACCGTCCCTCCATGAATGATTTGTTGTGGAATCTAGAATTTGCTCTCAACCTGCAAGAGAACGTTGATGGTTCAACTCACTCTTCTCGTGTTGAGGAAAGTGAGTTTGAAGAAATAAGCTTGAGAGACAAGGACATTGCTGCCCATTATAAGAACCTGAGCCTTGGAAGTGAGCATGAGCTTAGCCAGGATTCAAGTGAGAATCCCACTGCCATCTTCTCACAACTTGTCAATCCTACAGGGCGATGA 2292 0.4415 MHTRACLLLSLVGILVLLNGIHGAWTEEPGSLILGCGLGEGGAKDVDGRQWSPDDKFLEAQGDAITSKASYQDPSVLSEVPYMSARVFTSEATYKFPVLPDKRYWLRLHFYPSLYGSLNPSDSYFSVTANGVTLLSNFSASITCEALSQAYIDREYSLAPLNTDSLTLTFKPSDKYKGAFAFINGIQLIPMPELFDSGALVGYADQTVDVKSLNLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLYGAATGVTNQAEKDVQINYQTMPRYVAPADVYSTSRSMGNDKDINMGFNLTWIFQIDPNSMYLTRLHFCDYYSSKVNEIVFNIYVNNQTAEAQADVIGWTGGKGVPTYKDYVVYVQDVEGDEQLWLALHPAPDTMPEFYDAILNGVEIFKINDTNLSGPNPQPSDMFLRHQGDGMGFQNPRAYDKNAVIGGAAGGAAGFALMAAICVAVYHKKKRAPGSDTHTSWLPIYLNSHTNGSKSTSSGKSIANGNLSVMAQGLCRYFSLQEIKHATKNFDESNVIGVGGFGKVYKGVIDNGTKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMALGTFREHLYKGNKPLSTLSWKQRPVLNPNLPKEQVSLADWALICKQKGTLEDIIDPHIKGKINPESLKKFVDTAEKCLSDSGLDRPSMNDLLWNLEFALNLQENVDGSTHSSRVEESEFEEISLRDKDIAAHYKNLSLGSEHELSQDSSENPTAIFSQLVNPTGR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00126 763 Pfam Protein tyrosine and serine/threonine kinase 525 614 IPR001245 GO:0004672|GO:0006468
Sebi172g00126 763 SMART serkin_6 521 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi172g00126 763 FunFam FERONIA receptor-like kinase 31 192 - -
Sebi172g00126 763 Pfam Malectin-like domain 35 398 IPR024788 -
Sebi172g00126 763 Gene3D - 34 191 - -
Sebi172g00126 763 Gene3D - 213 399 - -
Sebi172g00126 763 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Sebi172g00126 763 FunFam receptor-like protein kinase FERONIA 483 596 - -
Sebi172g00126 763 ProSiteProfiles Protein kinase domain profile. 521 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi172g00126 763 FunFam FERONIA receptor-like kinase 213 399 - -
Sebi172g00126 763 Gene3D Phosphorylase Kinase; domain 1 481 596 - -
Sebi172g00126 763 SUPERFAMILY Protein kinase-like (PK-like) 497 621 IPR011009 -
Sebi172g00126 763 PANTHER OS03G0124300 PROTEIN-RELATED 31 467 IPR046957 GO:0004672
Sebi172g00126 763 Gene3D Transferase(Phosphotransferase) domain 1 602 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00126 Sebi-Chr172 1362868 1365459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00126 621 763 Receptor kinase-like Gene Family AT3G51550 44.099 1.11e-33 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi172g00126 Malectin_like 1.6e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00126 - - gmx:102659961 1021.54