Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00098 ATGATAAGAAAGGAGCTCCTAACCTTACTGGAGCATGACAATGCTAAGTATCCACTTGATGAGGTAGTGAATAAGGATAAAAGAAAAGGAGCCAAGCGTGTAGCAAATGGGCCTGCTGTCCCTGTGATAAAAGATTTCCAGGAGGATGAGATGAAAGATGCTGATCAGTTGATAAAGGATGAAGCCCAGTATCTCCGCGTGGCAATGGGGCATGAAAGTGATTCCCTTGATGATTTTGTTGAAGCACATACAACTTGCATTAATGATTTAATGTACTTTGCCACCCGTAATGCCTATGGTCTATCTAGTGTTGCTGGAAACATGGAGAAGCTAGCAGCTTTGCAGGGTGAATTTGATGATGTGAGAAGCAAGTTGGATGGTAAGGAGAAGATGGTACGTCTTGAGAAGAAGGTTACAGTACTCACGCAAGGCTATGAGATGAGAGCAAAAAAAAGTCTTTGGCCACAAATTGAAGCCACTTTCAAGCAGATGGACATAGCTGCAACAGAATCAGAATGTTTTCAAGCTTTACAAAAGCAAGCAATTAGCAGCATCACACAGGATAAAAATCTTTGGACTGAAGTACAGAAGCAAAAGGAACTTGAGAAAACTTTACAAAAGAGATATGGGGATCTTATAGCAGAGATTGAAAGGTTACAAAATGTCATGAACCAGTTACGGGCGCAAGCACAACATCAAGAAGAAATTGAAGCAAATAATCGTGCACTTGAGCTTACTGAAGCCACAGCTGATCAAATTAATGTGCAGGGCACTTCTAGCTCCAAAAATGATATGGATGTGGATTCTTGTAAAGAGGAAACAACACACAACACTGATATTAAATTGCCAGATGCACCTGCTGCTGAGGATGAGAGTGCAAACGTGGCAGAAGGTAAAAACACTGGAAGTGATATTGACAACAAAGAAACCACACTAGATGTGAGTGCTGCAGTGGAAATAAGTAGTATTGAGGGAAATGGGGAAGAGGATCGAAATGTTGAGAATCCAGACGAGGCTGTAGAAGCTGTAAACAAACCTGATAATAGCTTAAGAGAAAGCACCCCCCTTGATGACGGGAATAACACGCAAGTTGCTGATGGCAAGAGAGGAGGTAAATTAGGCTGA 1125 0.4169 MIRKELLTLLEHDNAKYPLDEVVNKDKRKGAKRVANGPAVPVIKDFQEDEMKDADQLIKDEAQYLRVAMGHESDSLDDFVEAHTTCINDLMYFATRNAYGLSSVAGNMEKLAALQGEFDDVRSKLDGKEKMVRLEKKVTVLTQGYEMRAKKSLWPQIEATFKQMDIAATESECFQALQKQAISSITQDKNLWTEVQKQKELEKTLQKRYGDLIAEIERLQNVMNQLRAQAQHQEEIEANNRALELTEATADQINVQGTSSSKNDMDVDSCKEETTHNTDIKLPDAPAAEDESANVAEGKNTGSDIDNKETTLDVSAAVEISSIEGNGEEDRNVENPDEAVEAVNKPDNSLRESTPLDDGNNTQVADGKRGGKLG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00098 374 MobiDBLite consensus disorder prediction 296 317 - -
Sebi172g00098 374 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 223 IPR047242 GO:0000398|GO:0000974
Sebi172g00098 374 MobiDBLite consensus disorder prediction 347 361 - -
Sebi172g00098 374 Coils Coil 202 239 - -
Sebi172g00098 374 MobiDBLite consensus disorder prediction 265 286 - -
Sebi172g00098 374 Pfam pre-mRNA splicing factor component 1 76 IPR021786 -
Sebi172g00098 374 MobiDBLite consensus disorder prediction 253 374 - -
Sebi172g00098 374 MobiDBLite consensus disorder prediction 324 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00098 Sebi-Chr172 1116252 1118691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00098 1 255 MYB-Related Transcription Factor Family AT1G09770 49.615 8.78e-72 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00098 K12860 - gmx:100801352 388.267