Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00086 ATGTGCATTCTGTCTGCATCTGGTGCCATCTCTAATGCCTCTCTTCGTCAACCAGCATCCTCAGGAGGCAACATTACATATGAGGGTCGGTTTGAGATTATTTCACTTACTGGTTCCTATGTTCGTAATGAACTTGGAGGTCGAAGTGGTGGTCTCAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGCGGAGTTGGTGGGCCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTCTTGACACCAAGAAGGATACAGGTGCTGGTGTAAAAGGTGATGCCTCTGCTAGCAAGTTGCCATCACCAGTTGGTGAATCAGTATCAAGTTTAGGTTTCCGCCAAACAGTTGACTGTTCCAGTGGGAATCCAATCCGGGGAAATGATGAGCATCAAACTATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCATGTCACGCCTTCCCGGTCCACAGACTGGGGTGGTCATCCAGACTCGAGAAATGCTGGTTATGAGCTGACAGGAAGAACAGGTCATGGGGCACACCAGTCTCCTGAAAATGGAGGCTATGACCAAATTCCTGATTGA 594 0.4731 MCILSASGAISNASLRQPASSGGNITYEGRFEIISLTGSYVRNELGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFLDTKKDTGAGVKGDASASKLPSPVGESVSSLGFRQTVDCSSGNPIRGNDEHQTMGGSHFMIQQLGLHVTPSRSTDWGGHPDSRNAGYELTGRTGHGAHQSPENGGYDQIPD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00086 197 CDD DUF296 2 85 IPR005175 -
Sebi172g00086 197 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 85 IPR005175 -
Sebi172g00086 197 Gene3D - 1 98 - -
Sebi172g00086 197 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 123 IPR039605 GO:0003680
Sebi172g00086 197 MobiDBLite consensus disorder prediction 155 197 - -
Sebi172g00086 197 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 86 - -
Sebi172g00086 197 ProSiteProfiles PPC domain profile profile. 1 110 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00086 Sebi-Chr172 925180 927306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00086 1 197 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 54.630 2.82e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00086 - - gmx:100809675 340.887